RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 GNG12Q9UBI6 72 aa14.79□□□□□ -0.04
CLSTN3-202ENST00000331148 DNAJC13O75165 2243 aa14.79□□□□□ -0.04
CLSTN3-202ENST00000331148 TET2Q6N021 2002 aaPredicted RBP14.79□□□□□ -0.04
CLSTN3-202ENST00000331148 ASPMQ8IZT6 3477 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 hDV102S1A0JD36 115 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 CRXO43186 299 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 TAS2R45P59539 299 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 C3AR1Q16581 482 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 LINC00479Q96M42 142 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 CSTL1Q9H114 145 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 OBP2BQ9NPH6 170 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 SH2D7A6NKC9 451 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 SLC25A34Q6PIV7 304 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 TRAT1Q6PIZ9 186 aa14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 FOXA2Q9Y261 457 aaPredicted RBP14.78□□□□□ -0.04
CLSTN3-202ENST00000331148 GATA2P23769 480 aaPredicted RBP14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 HSPE1P61604 102 aaKnown RBP14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 EDDM3AQ14507 147 aa14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 FAM90A1Q86YD7 464 aa14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 OR2T6Q8NHC8 308 aa14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 SNRNP40Q96DI7 357 aaKnown RBP14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 SPRR3Q9UBC9 169 aa14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 DUSP13Q9UII6 198 aa14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 HCFC1P51610 2035 aa14.77□□□□□ -0.04
CLSTN3-202ENST00000331148 MOB3BQ86TA1 216 aa14.77□□□□□ -0.05
CLSTN3-202ENST00000331148 TMEM14BQ9NUH8 114 aa14.77□□□□□ -0.05
CLSTN3-202ENST00000331148 IGKV1OR2-108A0A075B7D4 117 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 SYS1-DBNDD2H3BUS1 97 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 MPV17P39210 176 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 KIR2DS2P43631 304 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 CAMPP49913 170 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 MRPL49Q13405 166 aaKnown RBP14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 C12orf54Q6X4T0 127 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 ZADH2Q8N4Q0 377 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 OR4S2Q8NH73 311 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 IFI27L2Q9H2X8 130 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 JPT1Q9UK76 154 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 IGHV3-13P01766 116 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 IGHV3-7P01780 117 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 C8orf88P0DMB2 117 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 PSG9Q00887 426 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 PRR27Q6MZM9 219 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 DDB2Q92466 427 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 NUDT11Q96G61 164 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 SCNM1Q9BWG6 230 aa14.76□□□□□ -0.05
CLSTN3-202ENST00000331148 LOC400499M0QZD8 3231 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 J3QR06 171 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 IGHG3P01860 377 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 MYOD1P15172 320 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 S100A7P31151 101 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 WDR82Q6UXN9 313 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 LINC00173Q6ZV60 143 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 HINT2Q9BX68 163 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 ZFHX4Q86UP3 3567 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 A0A1B0GXF2 115 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 K7ERU9 68 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 REG1BP48304 166 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 FAM162BQ5T6X4 162 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 IGFL3Q6UXB1 125 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 SLC25A33Q9BSK2 321 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 C19orf24Q9BVV8 132 aa14.75□□□□□ -0.05
CLSTN3-202ENST00000331148 AKAP13Q12802 2813 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 IGHV1-24A0A0C4DH33 117 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 HIGD1CA8MV81 97 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 CORTO00230 105 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 ZNF134P52741 427 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 UBE2L3P68036 154 aaKnown RBP14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 SMIM21Q3B7S5 101 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 PRR31Q5SQ13 230 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 ATP5L2Q7Z4Y8 100 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 SCRT2Q9NQ03 307 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 CACNA1DQ01668 2161 aa14.74□□□□□ -0.05
CLSTN3-202ENST00000331148 C1orf229Q6ZS94 237 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 CD177Q8N6Q3 437 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 SLC25A2Q9BXI2 301 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 CXXC4Q9H2H0 198 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 IDI2-AS1Q9NZ38 188 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 AMMECR1Q9Y4X0 333 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 GAGE12BA1L429 117 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 VWC2LB2RUY7 222 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 CD5LO43866 347 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 FAM71F2Q6NXP2 309 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 VWA1Q6PCB0 445 aa14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 KLF14Q8TD94 323 aaPredicted RBP14.73□□□□□ -0.05
CLSTN3-202ENST00000331148 HSBP1L1C9JCN9 74 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 HLA-DRB1P01911 266 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 MORN5Q5VZ52 161 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 FAM167A-AS1Q96KT0 104 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 TMEM191AQ9H0A3 160 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 OR51B2Q9Y5P1 312 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 LOC102724200A0A096LPH7 203 aaPredicted RBP14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 TRAV5A0A0B4J249 113 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 TRAV8-6A0A0B4J262 113 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 LEPROTL1O95214 131 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 VHLLQ6RSH7 139 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 CHCHD1Q96BP2 118 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 CHRDL1Q9BU40 450 aa14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 MRPL32Q9BYC8 188 aaKnown RBP14.72□□□□□ -0.05
CLSTN3-202ENST00000331148 CFAP47Q6ZTR5 3102 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms