RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RAI1Q7Z5J4 1906 aaPredicted RBP11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 PRR27Q6MZM9 219 aa11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
ATP2C1-201ENST00000328560 C9JCJ5 164 aa11.4□□□□□ -0.59
ATP2C1-201ENST00000328560 NDUFB3O43676 98 aa11.4□□□□□ -0.59
ATP2C1-201ENST00000328560 HCP5Q6MZN7 132 aa11.4□□□□□ -0.59
ATP2C1-201ENST00000328560 TANC2Q9HCD6 1990 aa11.4□□□□□ -0.59
ATP2C1-201ENST00000328560 SLC25A33Q9BSK2 321 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 TPPP2P59282 170 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 CYB5R2Q6BCY4 276 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 DMRTC2Q8IXT2 367 aaPredicted RBP11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 OSR1Q8TAX0 266 aaPredicted RBP11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 DNAJC4Q9NNZ3 241 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 DLL1O00548 723 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 PRR31Q5SQ13 230 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 C19orf35Q6ZS72 473 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 ZNF355PQ9NSJ1 428 aa11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 POLR3KQ9Y2Y1 108 aaPredicted RBP11.39□□□□□ -0.59
ATP2C1-201ENST00000328560 ORM2P19652 201 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 PCP4P48539 62 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 CASP6P55212 293 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 IBA57Q5T440 356 aaKnown RBP11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 TEX36Q5VZQ5 186 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 ZNF705AQ6ZN79 300 aaPredicted RBP11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 ZNF833PQ6ZTB9 187 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 FNDC4Q9H6D8 234 aaPredicted RBP11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 EREGO14944 169 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 FCN3O75636 299 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 VN1R17PQ8TDU5 208 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 ZNF292O60281 2723 aa11.38□□□□□ -0.59
ATP2C1-201ENST00000328560 MOSP00540 346 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 KRTDAPP60985 99 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 RELQ04864 619 aaPredicted RBP11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 TDRG1Q3Y452 100 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 Q6ZWC4 215 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 NUP37Q8NFH4 326 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 RITA1Q96K30 269 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 PAM16Q9Y3D7 125 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 CEP295Q9C0D2 2601 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 SFTPCP11686 197 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 PMCHP20382 165 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 RANP62826 216 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 C10orf113Q5VZT2 155 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 H3BTX0 84 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 USF1P22415 310 aaPredicted RBP11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 CDKN1AP38936 164 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 SSTP61278 116 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 PAXXQ9BUH6 204 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 TMEM106BQ9NUM4 274 aa11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 MRPL36Q9P0J6 103 aaKnown RBP11.37□□□□□ -0.59
ATP2C1-201ENST00000328560 GNB4Q9HAV0 340 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 FNDC10F2Z333 226 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 TMEM178BH3BS89 294 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 LINC00310P59036 64 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 OR5AN1Q8NGI8 311 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 FAM168AQ92567 244 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 SLC25A2Q9BXI2 301 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 AMMECR1Q9Y4X0 333 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 TLN1Q9Y490 2541 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 ZNF253O75346 499 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 NBL1P41271 181 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 GNG5P63218 68 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 MEF2CQ06413 473 aaPredicted RBP11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 TMEM30BQ3MIR4 351 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 SIGLECL1Q8N7X8 197 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 OR1B1Q8NGR6 318 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 LINC00574Q9H8X3 128 aa11.36□□□□□ -0.59
ATP2C1-201ENST00000328560 LYNX1G3V0Z9 82 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 THBDP07204 575 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 LYNX1P0DP58 116 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 SPACA3Q8IXA5 215 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 A0A1W2PN81 502 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 TAS2R60P59551 318 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 WASHC3Q9Y3C0 194 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 LY96Q9Y6Y9 160 aa11.35□□□□□ -0.59
ATP2C1-201ENST00000328560 A0A1W2PRE2 83 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 NTF3P20783 257 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 SRIP30626 198 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 AMTP48728 403 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 SUB1P53999 127 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 SELENOTP62341 195 aa11.34□□□□□ -0.59
ATP2C1-201ENST00000328560 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms