RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 WDR82Q6UXN9 313 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 ZNF329Q86UD4 541 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 WFDC8Q8IUA0 241 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 NANOS1Q8WY41 292 aaKnown RBP10.41□□□□□ -0.74
CCDC60-201ENST00000327554 H1FXQ92522 213 aaKnown RBP10.41□□□□□ -0.74
CCDC60-201ENST00000327554 HINT2Q9BX68 163 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 OBP2BQ9NPH6 170 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 JPT1Q9UK76 154 aa10.41□□□□□ -0.74
CCDC60-201ENST00000327554 CER1O95813 267 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 MPV17P39210 176 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 LOXL3P58215 753 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 C3AR1Q16581 482 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 CD177Q8N6Q3 437 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 JMJD8Q96S16 334 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 MRPL32Q9BYC8 188 aaKnown RBP10.4□□□□□ -0.74
CCDC60-201ENST00000327554 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
CCDC60-201ENST00000327554 TNCP24821 2201 aa10.4□□□□□ -0.74
CCDC60-201ENST00000327554 LIPFP07098 398 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 COX8AP10176 69 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 RAB30Q15771 203 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 MLANAQ16655 118 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 UTF1Q5T230 341 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 MAP1LC3CQ9BXW4 147 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 OR51B2Q9Y5P1 312 aa10.4□□□□□ -0.75
CCDC60-201ENST00000327554 PPIAL4DF5H284 164 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 OR5AL1P0C617 328 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 PYYP10082 97 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 SEC11AP67812 179 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
CCDC60-201ENST00000327554 KLF13Q9Y2Y9 288 aaPredicted RBP10.39□□□□□ -0.75
CCDC60-201ENST00000327554 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 LYSMD4Q5XG99 296 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 SPEM1Q8N4L4 309 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 CT55Q8WUE5 264 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 PMCHL2Q9BQD1 86 aa10.39□□□□□ -0.75
CCDC60-201ENST00000327554 SRFP11831 508 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 HTR1DP28221 377 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 SAP25Q8TEE9 199 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 LRRC29Q8WV35 223 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 GTSF1Q8WW33 167 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 HES7Q9BYE0 225 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 MAGEA5P43359 124 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 ZNF138P52744 262 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 GNG5P63218 68 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 GTF2H5Q6ZYL4 71 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 BPIFA4PQ86YQ2 179 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 KLF14Q8TD94 323 aaPredicted RBP10.38□□□□□ -0.75
CCDC60-201ENST00000327554 FAM173AQ9BQD7 235 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 CXXC4Q9H2H0 198 aa10.38□□□□□ -0.75
CCDC60-201ENST00000327554 NBEAQ8NFP9 2946 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 FAM186AA6NE01 2351 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 H0Y8G0 127 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 F2RL2O00254 374 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 SNAI2O43623 268 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 PRCDQ00LT1 54 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 MRPL49Q13405 166 aaKnown RBP10.37□□□□□ -0.75
CCDC60-201ENST00000327554 LINC00322Q6ZN03 302 aaPredicted RBP10.37□□□□□ -0.75
CCDC60-201ENST00000327554 NEGR1Q7Z3B1 354 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
CCDC60-201ENST00000327554 SELENOKQ9Y6D0 94 aa10.37□□□□□ -0.75
CCDC60-201ENST00000327554 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.36□□□□□ -0.75
CCDC60-201ENST00000327554 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 C1orf185Q5T7R7 199 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 TMEM251Q8N6I4 163 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 NDFIP1Q9BT67 221 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 PAXXQ9BUH6 204 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 PRSS22Q9GZN4 317 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 H3BRM9 83 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 K7EP34 96 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 FGF6P10767 208 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 MYCNOSP40205 109 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 UQCRFS1P47985 274 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 POU2AF1Q16633 256 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 CR1LQ2VPA4 569 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 LEAP2Q969E1 77 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 ZNF714Q96N38 554 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 HSPB8Q9UJY1 196 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 SOX21Q9Y651 276 aaPredicted RBP10.36□□□□□ -0.75
CCDC60-201ENST00000327554 DSCAML1Q8TD84 2053 aa10.36□□□□□ -0.75
CCDC60-201ENST00000327554 PCNX2A6NKB5 2137 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 APOA2P02652 100 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 SAA2P0DJI9 122 aaPredicted RBP10.35□□□□□ -0.75
CCDC60-201ENST00000327554 RNASE2P10153 161 aaKnown RBP10.35□□□□□ -0.75
CCDC60-201ENST00000327554 APOBEC3AP31941 199 aaPredicted RBP10.35□□□□□ -0.75
CCDC60-201ENST00000327554 PRDX2P32119 198 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 LGALS7P47929 136 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 CD69Q07108 199 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 LINC00696Q6ZRV3 163 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 FXYD5Q96DB9 178 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 PGLYRP4Q96LB8 373 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 MLST8Q9BVC4 326 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 B4GALT7Q9UBV7 327 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 ZNF257Q9Y2Q1 563 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 ZNF137PP52743 207 aa10.35□□□□□ -0.75
CCDC60-201ENST00000327554 RBPJQ06330 500 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms