RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 P01737 135 aa9.74□□□□□ -0.85
DDR1-223ENST00000324771 GNLYP22749 145 aa9.74□□□□□ -0.85
DDR1-223ENST00000324771 CDX1P47902 265 aaPredicted RBP9.74□□□□□ -0.85
DDR1-223ENST00000324771 GAFA1Q96PS6 74 aa9.74□□□□□ -0.85
DDR1-223ENST00000324771 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
DDR1-223ENST00000324771 TM4SF5O14894 197 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 TRGC1P0CF51 173 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 AGAP20933 346 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 OR4A5Q8NH83 315 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 TMEM133Q9H2Q1 129 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 ARL2-SNX15V9GYD0 113 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 SH2D7A6NKC9 451 aaPredicted RBP9.73□□□□□ -0.85
DDR1-223ENST00000324771 TIMM23O14925 209 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 GOSR1O95249 250 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 C1QTNF9P0C862 333 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 IMMP2LQ96T52 175 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 SLC25A33Q9BSK2 321 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 SMDT1Q9H4I9 107 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 C5orf52A6NGY3 159 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 C15orf61A6NNL5 157 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 K7ENP7 123 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 RPLP1P05386 114 aaKnown RBP9.73□□□□□ -0.85
DDR1-223ENST00000324771 CBLN1P23435 193 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 EIF4E3Q8N5X7 224 aaKnown RBP9.73□□□□□ -0.85
DDR1-223ENST00000324771 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 MBNL3Q9NUK0 354 aaKnown RBP9.73□□□□□ -0.85
DDR1-223ENST00000324771 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
DDR1-223ENST00000324771 C10orf142B7Z368 130 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 WNT2P09544 360 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 ZNF134P52741 427 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 HLA-DRB5Q30154 266 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 NOL4LQ96MY1 436 aaPredicted RBP9.72□□□□□ -0.85
DDR1-223ENST00000324771 ERVK11-1P61568 191 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 MEF2CQ06413 473 aaPredicted RBP9.72□□□□□ -0.85
DDR1-223ENST00000324771 SCGB2A2Q13296 93 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 MST1LQ2TV78 715 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 CENPWQ5EE01 88 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
DDR1-223ENST00000324771 TREML4Q6UXN2 200 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 DERL1Q9BUN8 251 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 AMY1AP04745 511 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 FAM106CPP0CH98 169 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 IQCJQ1A5X6 159 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
DDR1-223ENST00000324771 TANC2Q9HCD6 1990 aa9.72□□□□□ -0.85
DDR1-223ENST00000324771 PYY3Q5JQD4 70 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 CHRDL1Q9BU40 450 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 SELENOTP62341 195 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 Q5PR19 223 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 HEPN1Q6WQI6 88 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 SSX8Q7RTT4 187 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 C11orf42Q8N5U0 333 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 SRSF12Q8WXF0 261 aaKnown RBP9.71□□□□□ -0.85
DDR1-223ENST00000324771 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 ANAPC10Q9UM13 185 aa9.71□□□□□ -0.85
DDR1-223ENST00000324771 TEX50A0A1B0GTY4 177 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 UBE2CO00762 179 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 PAX9P55771 341 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 TPPP2P59282 170 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 DIAPH2-AS1Q14236 149 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 C19orf35Q6ZS72 473 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 WDR83OSQ9Y284 106 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 FOXI3A8MTJ6 420 aaPredicted RBP9.71□□□□□ -0.86
DDR1-223ENST00000324771 NDUFS7O75251 213 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 CD5P06127 495 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 GNG5P63218 68 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 SRSF4Q08170 494 aaKnown RBP9.71□□□□□ -0.86
DDR1-223ENST00000324771 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
DDR1-223ENST00000324771 SEM1Q6ZVN7 128 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 PPP1R27Q86WC6 154 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 DMRTC2Q8IXT2 367 aaPredicted RBP9.7□□□□□ -0.86
DDR1-223ENST00000324771 RNF2Q99496 336 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 MSRB2Q9Y3D2 182 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 IGHV3-11P01762 117 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 MSMPQ1L6U9 139 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 NBEAP1P0C6P0 100 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 SRP14P37108 136 aaKnown RBP9.7□□□□□ -0.86
DDR1-223ENST00000324771 LOXL3P58215 753 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 LBHQ53QV2 105 aaPredicted RBP9.7□□□□□ -0.86
DDR1-223ENST00000324771 C5orf17Q8NAS9 161 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 PAM16Q9Y3D7 125 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 MGAQ8IWI9 3026 aa9.7□□□□□ -0.86
DDR1-223ENST00000324771 CENPEQ02224 2701 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 TRBV6-6A0A0A6YYG2 114 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 FOXH1O75593 365 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 CA1P00915 261 aaPredicted RBP9.69□□□□□ -0.86
DDR1-223ENST00000324771 IGHV2-70P01814 119 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 PLA2G5P39877 138 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 RPL23P62829 140 aaKnown RBP9.69□□□□□ -0.86
DDR1-223ENST00000324771 RELBQ01201 579 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 TCF23Q7RTU1 214 aa9.69□□□□□ -0.86
DDR1-223ENST00000324771 RNASE7Q9H1E1 156 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms