RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 STAG3L3P0CL85 134 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 NTF3P20783 257 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 FXYD3Q14802 87 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 RPEL1Q2QD12 228 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 WNK2Q9Y3S1 2297 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 ZNF324O75467 553 aaPredicted RBP12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 IGKV1-16P04430 117 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 SRIP30626 198 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 TMEM249Q2WGJ8 235 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 FBLN7Q53RD9 439 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 TMEM136Q6ZRR5 245 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 EAF1Q96JC9 268 aaPredicted RBP12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 CLEC7AQ9BXN2 247 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 GNB1LQ9BYB4 327 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 CACNA1BQ00975 2339 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 KBTBD11-OT1A0A1B0GTJ5 212 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 CA2P00918 260 aa12.69□□□□□ -0.38
SHROOM1-201ENST00000319854 TREML4Q6UXN2 200 aa12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 Q8NA96 180 aa12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 TSKUQ8WUA8 353 aa12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 MGST2Q99735 147 aa12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 SEPSECSQ9HD40 501 aaKnown RBP12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 RAI1Q7Z5J4 1906 aaPredicted RBP12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 TRAT1Q6PIZ9 186 aa12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 SPACA3Q8IXA5 215 aa12.68□□□□□ -0.38
SHROOM1-201ENST00000319854 IGHV2-70DA0A0C4DH43 119 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 BMPR1BO00238 502 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 ADIPOQQ15848 244 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 FAM169BQ8N8A8 192 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 IL19Q9UHD0 177 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 TCF19Q9Y242 345 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 TRAV9-1A0A075B6T8 112 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 STUMQ69YW2 141 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 MRPL54Q6P161 138 aaKnown RBP12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 MOB3BQ86TA1 216 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 OR4F17Q8NGA8 305 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 OR4C5Q8NGB2 326 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 C1orf159Q96HA4 380 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 MS4A5Q9H3V2 200 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 SAP30LQ9HAJ7 183 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 BET1LQ9NYM9 111 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 RELBQ01201 579 aa12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 PDLIM3Q53GG5 364 aaPredicted RBP12.67□□□□□ -0.38
SHROOM1-201ENST00000319854 F2RL2O00254 374 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 CXorf1O96002 111 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 IGHV2-26A0A0B4J1V2 119 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 IGHV3-48P01763 117 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 THBDP07204 575 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 GCHFRP30047 84 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 OR4S2Q8NH73 311 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 SLC35D1Q9NTN3 355 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 DSCAML1Q8TD84 2053 aa12.66□□□□□ -0.38
SHROOM1-201ENST00000319854 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 ACTL6BO94805 426 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 LYNX1P0DP58 116 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 CFHR2P36980 270 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 CX3CL1P78423 397 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 TCTEX1D1Q8N7M0 179 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 SLC25A10Q9UBX3 287 aaPredicted RBP12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 CBY3A6NI87 242 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 IGLL1P15814 213 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 CHODLQ9H9P2 273 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 DYNLRB1Q9NP97 96 aa12.65□□□□□ -0.38
SHROOM1-201ENST00000319854 GFRA3O60609 400 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 DIAPH2-AS1Q14236 149 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 MLANAQ16655 118 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 SPATA12Q7Z6I5 190 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 SVIPQ8NHG7 77 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 ST6GALNAC6Q969X2 333 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 ENY2Q9NPA8 101 aa12.65□□□□□ -0.39
SHROOM1-201ENST00000319854 ARHGAP32A7KAX9 2087 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 OPRK1P41145 380 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 EBLN2Q6P2I7 272 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 PQLC2Q6ZP29 291 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 KLHDC1Q8N7A1 406 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 CDC42EP3Q9UKI2 254 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 TRBV9A0A0B4J1U6 114 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 C17orf100A8MU93 164 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 GATA2P23769 480 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 Q56UQ5 140 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 ZNF788Q6ZQV5 615 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 ZNF439Q8NDP4 499 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 IDI2-AS1Q9NZ38 188 aa12.64□□□□□ -0.39
SHROOM1-201ENST00000319854 APELAP0DMC3 54 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 NBL1P41271 181 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 KIR3DL3Q8N743 410 aa12.63□□□□□ -0.39
SHROOM1-201ENST00000319854 TXNDC17Q9BRA2 123 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms