RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 KCNIP3Q9Y2W7 256 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 RYR3Q15413 4870 aa13.18□□□□□ -0.3
TPM1-203ENST00000317516 OPRK1P41145 380 aa13.17□□□□□ -0.3
TPM1-203ENST00000317516 TFPI2P48307 235 aa13.17□□□□□ -0.3
TPM1-203ENST00000317516 OR4C16Q8NGL9 310 aa13.17□□□□□ -0.3
TPM1-203ENST00000317516 TMEM231Q9H6L2 316 aa13.17□□□□□ -0.3
TPM1-203ENST00000317516 SCP2D1Q9UJQ7 156 aa13.17□□□□□ -0.3
TPM1-203ENST00000317516 PUS1Q9Y606 427 aaKnown RBP eCLIP13.17□□□□□ -0.3
TPM1-203ENST00000317516 IGKV3-7A0A075B6H7 116 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 A0A0G2JRQ6 117 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 RPS10-NUDT3A0A1W2PQS6 291 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
TPM1-203ENST00000317516 HTR2BP41595 481 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 AARDQ4LEZ3 155 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 Q6ZRM9 215 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 SELENOHQ8IZQ5 122 aaKnown RBP13.16□□□□□ -0.3
TPM1-203ENST00000317516 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 HEYLQ9NQ87 328 aaPredicted RBP13.16□□□□□ -0.3
TPM1-203ENST00000317516 DNAH7Q8WXX0 4024 aa13.16□□□□□ -0.3
TPM1-203ENST00000317516 IGHV3OR16-13A0A075B7E8 117 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 TRAV30A0A087WSZ9 112 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 IGHV3-74A0A0B4J1X5 117 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 A0A1W2PS18 150 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 CRYM-AS1A6NIL9 109 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
TPM1-203ENST00000317516 CLN5O75503 358 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
TPM1-203ENST00000317516 NPPCP23582 126 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 RPL11P62913 178 aaKnown RBP13.15□□□□□ -0.3
TPM1-203ENST00000317516 DEFB135Q30KP9 77 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 TMEM268Q5VZI3 342 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 OR51S1Q8NGJ8 323 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 TMEM230Q96A57 120 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 VSIRQ9H7M9 311 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 MAP6D1Q9H9H5 199 aa13.15□□□□□ -0.3
TPM1-203ENST00000317516 ANKRD20A5PA0PJZ0 165 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 FABP12A6NFH5 140 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 BSXQ3C1V8 233 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 NOXA1Q86UR1 476 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 APRG1Q8IVJ8 170 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 RNF183Q96D59 192 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 NARS2Q96I59 477 aaKnown RBP13.14□□□□□ -0.31
TPM1-203ENST00000317516 CSTL1Q9H114 145 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
TPM1-203ENST00000317516 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 TNFRSF9Q07011 255 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 METTL26Q96S19 204 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
TPM1-203ENST00000317516 ZFAND3Q9H8U3 227 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
TPM1-203ENST00000317516 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 A0A0J9YWU9 116 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 A0A1B0GU03 582 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 MPTX1A8MV57 137 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 DFFBO76075 338 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 SLC25A4P12235 298 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 TNFSF8P32971 234 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 MLANAQ16655 118 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 C2orf83Q53S99 150 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 LYG2Q86SG7 212 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
TPM1-203ENST00000317516 SLIRPQ9GZT3 109 aaKnown RBP13.12□□□□□ -0.31
TPM1-203ENST00000317516 MS4A6AQ9H2W1 248 aa13.12□□□□□ -0.31
TPM1-203ENST00000317516 IGHV3-66A0A0C4DH42 116 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 CXorf65A6NEN9 183 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 H3BMQ9 156 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 APOHP02749 345 aaPredicted RBP13.11□□□□□ -0.31
TPM1-203ENST00000317516 SULT1A3P0DMM9 295 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 SULT1A4P0DMN0 295 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 ANXA3P12429 323 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 ATF4P18848 351 aaPredicted RBP13.11□□□□□ -0.31
TPM1-203ENST00000317516 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
TPM1-203ENST00000317516 SLC24A4Q8NFF2 622 aa13.11□□□□□ -0.31
TPM1-203ENST00000317516 CRYBB3P26998 211 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 EIF2B2P49770 351 aaKnown RBP13.1□□□□□ -0.31
TPM1-203ENST00000317516 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 Q8WTZ3 238 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 GATAD1Q8WUU5 269 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 GRAMD2BQ96HH9 432 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 SOSTQ9BQB4 213 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
TPM1-203ENST00000317516 RABAC1Q9UI14 185 aa13.1□□□□□ -0.31
TPM1-203ENST00000317516 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 AKR1C4P17516 323 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 CCR6P51684 374 aa13.09□□□□□ -0.31
TPM1-203ENST00000317516 AP3S2P59780 193 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms