RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 CRYGCP07315 174 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 OPRK1P41145 380 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 IER3P46695 156 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 ELLP55199 621 aaPredicted RBP5.48□□□□□ -1.53
PTCD2-201ENST00000308077 AKR1C1Q04828 323 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 LFNGQ8NES3 379 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 LRRC20Q8TCA0 184 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 SAT2Q96F10 170 aaPredicted RBP5.48□□□□□ -1.53
PTCD2-201ENST00000308077 MISP3Q96FF7 219 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 GGTLC1Q9BX51 225 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 IGHV3-21A0A0B4J1V1 117 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 CD5LO43866 347 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 SCO1O75880 301 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 GPX4P36969 197 aaPredicted RBP5.48□□□□□ -1.53
PTCD2-201ENST00000308077 CAMLGP49069 296 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 RAB5CP51148 216 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 AKR1C8PQ5T2L2 129 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 MIC13Q5XKP0 118 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 TEPPQ6URK8 271 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 SSX7Q7RTT5 188 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 TMEM144Q7Z5S9 345 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 TTC9CQ8N5M4 171 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 SGMS2Q8NHU3 365 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 FAM213BQ8TBF2 198 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 CACNG8Q8WXS5 425 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 PARP11Q9NR21 331 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 RPRMQ9NS64 109 aa5.48□□□□□ -1.53
PTCD2-201ENST00000308077 MGAM2Q2M2H8 2515 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 UMAD1C9J7I0 102 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 TRIM77I1YAP6 450 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 I3L2K1 104 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 AGPAT2O15120 278 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 MPDU1O75352 247 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 MT-CO2P00403 227 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 RAB2AP61019 212 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 BLOC1S1P78537 153 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 SERF2P84101 59 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 ZNF616Q08AN1 781 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 ZNF726P1Q15940 193 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 FFAR4Q5NUL3 377 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 Q6YL49 198 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 Q6ZS46 218 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 LYPD6BQ8NI32 183 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 ACY3Q96HD9 319 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 SLC35E1Q96K37 410 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 FANCD2OSQ96PS1 177 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 HRH4Q9H3N8 390 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 PRDM13Q9H4Q3 707 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 TMEM231Q9H6L2 316 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 PFDN2Q9UHV9 154 aa5.47□□□□□ -1.53
PTCD2-201ENST00000308077 IGLV11-55A0A075B6I3 123 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 IGKV1D-37A0A075B6S9 117 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 C9JQL5 133 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 C17orf112F2Z3M2 114 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 G3V318 75 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 K7EIM0 57 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 EIF3GO75821 320 aaKnown RBP eCLIP5.46□□□□□ -1.53
PTCD2-201ENST00000308077 YIF1AO95070 293 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 DEFA4P12838 97 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 RND2P52198 227 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 BLCAPP62952 87 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 DEFA5Q01523 94 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 ECSCRQ19T08 205 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 TMEM41BQ5BJD5 291 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 C19orf54Q5BKX5 351 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 GCSAMLQ5JQS6 135 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 BPIFCQ8NFQ6 507 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 OR5T1Q8NG75 326 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 NPIPB3Q92617 1050 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 PITPNC1Q9UKF7 332 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 SLC45A2Q9UMX9 530 aa5.46□□□□□ -1.53
PTCD2-201ENST00000308077 ANK3Q12955 4377 aaKnown RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 A0A1B0GV50 99 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 CORTO00230 105 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 LINC00869P0C866 280 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 ATF4P18848 351 aaPredicted RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 GATA2P23769 480 aaPredicted RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 OR10J1P30954 320 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 CRIP2P52943 208 aaPredicted RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 CCL20P78556 96 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 PRR20EP86478 221 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 PRR20CP86479 221 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 PRR20DP86480 221 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 PRR20BP86481 221 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 PRR20AP86496 221 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 C9orf152Q5JTZ5 239 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 SPSB3Q6PJ21 355 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 UNQ5815/PRO19632Q6UWF5 114 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 C16orf82Q7Z2V1 217 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 RPP25LQ8N5L8 163 aaKnown RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 EIF4E3Q8N5X7 224 aaKnown RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 ZNF709Q8N972 641 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 THAP8Q8NA92 274 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 FAM110DQ8TAY7 271 aaPredicted RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 MARC2Q969Z3 335 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 RCC1LQ96I51 464 aaKnown RBP5.46□□□□□ -1.54
PTCD2-201ENST00000308077 SCRT1Q9BWW7 348 aa5.46□□□□□ -1.54
PTCD2-201ENST00000308077 TNFRSF19Q9NS68 423 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms