RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ZNF134P52741 427 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 ERHP84090 104 aaKnown RBP9.36□□□□□ -0.91
TRUB1-201ENST00000298746 TRIP6Q15654 476 aaKnown RBP9.36□□□□□ -0.91
TRUB1-201ENST00000298746 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 OR10W1Q8NGF6 305 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 NAA38Q9BRA0 125 aaKnown RBP9.36□□□□□ -0.91
TRUB1-201ENST00000298746 CALYQ9NYX4 217 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 TANC2Q9HCD6 1990 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 TET2Q6N021 2002 aaPredicted RBP9.36□□□□□ -0.91
TRUB1-201ENST00000298746 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 PPIAL4DF5H284 164 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 HTR1DP28221 377 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 KIR2DS2P43631 304 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 RTL8BQ17RB0 113 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 PRNDQ9UKY0 176 aa9.36□□□□□ -0.91
TRUB1-201ENST00000298746 A0A1W2PRE2 83 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 MGST3O14880 152 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 P01737 135 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 APELAP0DMC3 54 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 FAM162BQ5T6X4 162 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 MOGAT3Q86VF5 341 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 CEP192Q8TEP8 1941 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PGPA6NDG6 321 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PEX7O00628 323 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 SAA2P0DJI9 122 aaPredicted RBP9.35□□□□□ -0.91
TRUB1-201ENST00000298746 REG1BP48304 166 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PDPNQ86YL7 162 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 MAFAQ8NHW3 353 aaPredicted RBP9.35□□□□□ -0.91
TRUB1-201ENST00000298746 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 KLF13Q9Y2Y9 288 aaPredicted RBP9.35□□□□□ -0.91
TRUB1-201ENST00000298746 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 TOMM40O96008 361 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 IGHV1-2P23083 117 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 BPIFB3P59826 476 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PRR20EP86478 221 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PRR20CP86479 221 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PRR20DP86480 221 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PRR20BP86481 221 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 PRR20AP86496 221 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 MUC15Q8N387 334 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 OR1B1Q8NGR6 318 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 SLC25A33Q9BSK2 321 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 SSUH2Q9Y2M2 353 aa9.35□□□□□ -0.91
TRUB1-201ENST00000298746 EP300Q09472 2414 aaPredicted RBP9.35□□□□□ -0.91
TRUB1-201ENST00000298746 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 HBBP68871 147 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 EIF4EBP1Q13541 118 aaPredicted RBP9.34□□□□□ -0.91
TRUB1-201ENST00000298746 TMEM177Q53S58 311 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 LRRC10Q5BKY1 277 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 ZNF766Q5HY98 468 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 NPIPB3Q92617 1050 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 FLYWCH2Q96CP2 140 aaKnown RBP9.34□□□□□ -0.91
TRUB1-201ENST00000298746 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 CACNA1HO95180 2353 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 A8MWL6 223 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 SYS1-DBNDD2H3BUS1 97 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 K7EP13 123 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 COL8A1P27658 744 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 TMPRSS3P57727 454 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 MORN5Q5VZ52 161 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 IFI27L2Q9H2X8 130 aa9.34□□□□□ -0.91
TRUB1-201ENST00000298746 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
TRUB1-201ENST00000298746 IGKV1OR2-108A0A075B7D4 117 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 PRSS3P2Q8NHM4 247 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 ST20Q9HBF5 79 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 TRGV8A0A0C4DH27 118 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 C15orf65H3BRN8 121 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 REG1AP05451 166 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 PSG9Q00887 426 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 NHLH1Q02575 133 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 OR8A1Q8NGG7 326 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 NEUROG1Q92886 237 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 C1orf159Q96HA4 380 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 HES4Q9HCC6 221 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 ZNRD1Q9P1U0 126 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 MZT1Q08AG7 82 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 CT45A1Q5HYN5 189 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 UTF1Q5T230 341 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 CT45A3Q8NHU0 189 aa9.33□□□□□ -0.92
TRUB1-201ENST00000298746 SERTM2A0A1B0GWG4 89 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 PRSS46E5RG02 174 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 K7ESF4 209 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 ENSAO43768 121 aaKnown RBP9.32□□□□□ -0.92
TRUB1-201ENST00000298746 HLA-DRB1P01911 266 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 IGKV1-16P04430 117 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 ARF6P62330 175 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 INO80CQ6PI98 192 aaPredicted RBP9.32□□□□□ -0.92
TRUB1-201ENST00000298746 FA2HQ7L5A8 372 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
TRUB1-201ENST00000298746 RAB9BQ9NP90 201 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms