RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
CPSF4-201ENST00000292476 IGHV2-70DA0A0C4DH43 119 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 ARSJQ5FYB0 599 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-201ENST00000292476 GCSAMLQ5JQS6 135 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 TMEM183AQ8IXX5 376 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 OR2T10Q8NGZ9 312 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 FLYWCH2Q96CP2 140 aaKnown RBP13.53□□□□□ -0.24
CPSF4-201ENST00000292476 C1orf159Q96HA4 380 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 ACY3Q96HD9 319 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 NABP2Q9BQ15 211 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 BET1LQ9NYM9 111 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 H0YJW9 148 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 CA2P00918 260 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PRR20EP86478 221 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PRR20CP86479 221 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PRR20DP86480 221 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PRR20BP86481 221 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PRR20AP86496 221 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 SSX2Q16385 188 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 TMEM177Q53S58 311 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PYY3Q5JQD4 70 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 CST9LP1Q5W188 147 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 VSTM2AQ8TAG5 236 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 RPEQ96AT9 228 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 PLEKHA3Q9HB20 300 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 BEX4Q9NWD9 120 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-201ENST00000292476 LY96Q9Y6Y9 160 aa13.53□□□□□ -0.24
CPSF4-201ENST00000292476 LINC00587B1AMM8 73 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 COX7A1P24310 79 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 ZFP36P26651 326 aaKnown RBP13.52□□□□□ -0.25
CPSF4-201ENST00000292476 HTR1DP28221 377 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 GCHFRP30047 84 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 ATP5G3P48201 142 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 C2orf83Q53S99 150 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 PNKDQ8N490 385 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 STPG3Q8N7X2 389 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 C11orf52Q96A22 123 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 PERPQ96FX8 193 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 C19orf24Q9BVV8 132 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 ZNRD1Q9P1U0 126 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 INSIG2Q9Y5U4 225 aa13.52□□□□□ -0.25
CPSF4-201ENST00000292476 CELSR1Q9NYQ6 3014 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 INS-IGF2F8WCM5 200 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 DEFA4P12838 97 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 AREGP15514 252 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 SLC25A16P16260 332 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 LGALS7P47929 136 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 TMEM144Q7Z5S9 345 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 OR4P4Q8NGL7 312 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 OR10D4PQ8NGN7 298 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 OR1L8Q8NGR8 309 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 OR4A5Q8NH83 315 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 DPM3Q9P2X0 92 aa13.51□□□□□ -0.25
CPSF4-201ENST00000292476 NDUFB4O95168 129 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 PAX2Q02962 417 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 FOXL1Q12952 345 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 RNASEH2CQ8TDP1 164 aaKnown RBP13.5□□□□□ -0.25
CPSF4-201ENST00000292476 HARBI1Q96MB7 349 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 TET2Q6N021 2002 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-201ENST00000292476 TRAV9-1A0A075B6T8 112 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 OOSP1A8MZH6 123 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 REG1BP48304 166 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 UBE2G2P60604 165 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 MINOS1Q5TGZ0 78 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 NECAP1Q8NC96 275 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 RNF5Q99942 180 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 SLC45A2Q9UMX9 530 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 MINOS1-NBL1R4GNA1 71 aa13.5□□□□□ -0.25
CPSF4-201ENST00000292476 A0A1W2PPQ1 181 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 LY6LH3BQJ8 138 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 TOX4O94842 621 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 IGKV1-16P04430 117 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 CCDC144NLQ6NUI1 221 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 VMO1Q7Z5L0 202 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 UHRF2Q96PU4 802 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 PFDN5Q99471 154 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 ELOVL1Q9BW60 279 aa13.49□□□□□ -0.25
CPSF4-201ENST00000292476 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 MAP1AP78559 2803 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-201ENST00000292476 IGHV1-3A0A0C4DH29 117 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 ODF3BA8MYP8 253 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 C9JCJ5 164 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 HIST1H1BP16401 226 aaKnown RBP13.48□□□□□ -0.25
CPSF4-201ENST00000292476 USF1P22415 310 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-201ENST00000292476 LGALS4P56470 323 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 VMA21Q3ZAQ7 101 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 TPTE2P1Q5T6R2 138 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 GFI1BQ5VTD9 330 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 LRRC75A-AS1Q8N1F1 130 aa13.48□□□□□ -0.25
CPSF4-201ENST00000292476 WFDC11Q8NEX6 87 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms