RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 MGAT4CQ9UBM8 478 aa7.12□□□□□ -1.27
HMHB1-201ENST00000289448 PRNDQ9UKY0 176 aa7.12□□□□□ -1.27
HMHB1-201ENST00000289448 C14orf166Q9Y224 244 aaKnown RBP7.12□□□□□ -1.27
HMHB1-201ENST00000289448 UFC1Q9Y3C8 167 aa7.12□□□□□ -1.27
HMHB1-201ENST00000289448 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 A0A0B4J2A0 478 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 C9orf170A2RU37 121 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 ZNF207O43670 478 aaKnown RBP7.11□□□□□ -1.27
HMHB1-201ENST00000289448 CXCL3P19876 107 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 PI3P19957 117 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 ELLP55199 621 aaPredicted RBP7.11□□□□□ -1.27
HMHB1-201ENST00000289448 UCP3P55916 312 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 RAP2BP61225 183 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 DHODHQ02127 395 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 PPP1R1AQ13522 171 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 OR5B3Q8NH48 314 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 MITD1Q8WV92 249 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 MARC2Q969Z3 335 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 BSCL2Q96G97 398 aaPredicted RBP7.11□□□□□ -1.27
HMHB1-201ENST00000289448 FAM212BQ9NTI7 297 aaPredicted RBP7.11□□□□□ -1.27
HMHB1-201ENST00000289448 SHPKQ9UHJ6 478 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 ALMS1Q8TCU4 4167 aa7.11□□□□□ -1.27
HMHB1-201ENST00000289448 TRAV25A0A0B4J276 109 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 I3L2K1 104 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 NDUFA4O00483 81 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 CYB5BO43169 146 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 IGHV3-48P01763 117 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 CTSGP08311 255 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 AKR1C4P17516 323 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 VAMP1P23763 118 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 SPSB3Q6PJ21 355 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 RBPMS2Q6ZRY4 209 aaKnown RBP7.1□□□□□ -1.27
HMHB1-201ENST00000289448 SLC38A6Q8IZM9 456 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 OR2C3Q8N628 320 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 UBAC2Q8NBM4 344 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 OR1L6Q8NGR2 347 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 OR1P1Q8NH06 330 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 TMEM230Q96A57 120 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 ZNF486Q96H40 463 aaPredicted RBP7.1□□□□□ -1.27
HMHB1-201ENST00000289448 HYLS1Q96M11 299 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 OVOL2Q9BRP0 275 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 RTBDNQ9BSG5 229 aaPredicted RBP7.1□□□□□ -1.27
HMHB1-201ENST00000289448 DAZ1Q9NQZ3 744 aaKnown RBP7.1□□□□□ -1.27
HMHB1-201ENST00000289448 FKBP11Q9NYL4 201 aa7.1□□□□□ -1.27
HMHB1-201ENST00000289448 GOSR2O14653 212 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 TSPAN4O14817 238 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 SFT2D2O95562 160 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 IGKV1-5P01602 117 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 P0C879 139 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 NKX2-5P52952 324 aaPredicted RBP7.09□□□□□ -1.27
HMHB1-201ENST00000289448 RND3P61587 244 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 PRCDQ00LT1 54 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 ANKRD55Q3KP44 614 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 Q56UQ5 140 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 H2BFWTQ7Z2G1 175 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 CCDC71LQ8N9Z2 235 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 OR2T35Q8NGX2 323 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 OR4A16Q8NH70 328 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 COQ8AQ8NI60 647 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 MISP3Q96FF7 219 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 TMEM56Q96MV1 263 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 TP53RKQ96S44 253 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 ATP6V0BQ99437 205 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 C20orf24Q9BUV8 137 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 GGTLC1Q9BX51 225 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 UBQLN2Q9UHD9 624 aa7.09□□□□□ -1.27
HMHB1-201ENST00000289448 LOC102724200A0A096LPH7 203 aaPredicted RBP7.08□□□□□ -1.28
HMHB1-201ENST00000289448 K7EMT4 169 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 MT-CO2P00403 227 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 S100GP29377 79 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 PIGPP57054 158 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 HSPE1P61604 102 aaKnown RBP7.08□□□□□ -1.28
HMHB1-201ENST00000289448 ZNF114Q8NC26 417 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 RNF2Q99496 336 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 SPAG8Q99932 426 aaPredicted RBP7.08□□□□□ -1.28
HMHB1-201ENST00000289448 KCNIP3Q9Y2W7 256 aa7.08□□□□□ -1.28
HMHB1-201ENST00000289448 IGHV3-49A0A0A0MS15 119 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 A0A0G2JRQ6 117 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 TEX13DA0A0J9YY54 714 aaPredicted RBP7.07□□□□□ -1.28
HMHB1-201ENST00000289448 CRYM-AS1A6NIL9 109 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 C15orf62A8K5M9 175 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 SMLR1H3BR10 107 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 CHEK1O14757 476 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 FCGR2BP31994 310 aaPredicted RBP7.07□□□□□ -1.28
HMHB1-201ENST00000289448 MFAP4P55083 255 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 H2BFSP57053 126 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 SUPT4H1P63272 117 aaKnown RBP7.07□□□□□ -1.28
HMHB1-201ENST00000289448 EWSR1Q01844 656 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMHB1-201ENST00000289448 SP6Q3SY56 376 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 GALNT14Q96FL9 552 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 OR10C1Q96KK4 312 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 NAA60Q9H7X0 242 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 SMPXQ9UHP9 88 aa7.07□□□□□ -1.28
HMHB1-201ENST00000289448 IGHV3OR16-13A0A075B7E8 117 aa7.06□□□□□ -1.28
HMHB1-201ENST00000289448 IGHV3-74A0A0B4J1X5 117 aa7.06□□□□□ -1.28
HMHB1-201ENST00000289448 IGHV7-4-1A0A0J9YVY3 117 aa7.06□□□□□ -1.28
HMHB1-201ENST00000289448 C3orf85A0A1B0GTC6 90 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms