RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 HIST1H1AQ02539 215 aaPredicted RBP6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 ATP5G2Q06055 141 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 WFDC11Q8NEX6 87 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 ATP5SQ99766 215 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 A0A1W2PS18 150 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 FAM90A9PA6NNJ1 464 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 FOSL1P15407 271 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 GPR183P32249 361 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 DUTP33316 252 aaKnown RBP6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 UBA52P62987 128 aaKnown RBP6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 BTF3L4Q96K17 158 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 PRSS22Q9GZN4 317 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 TMEM222Q9H0R3 208 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 OR51B2Q9Y5P1 312 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 RGS13O14921 159 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 DYNLT3P51808 116 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 B2MP61769 119 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 TMEM187Q14656 261 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 AANATQ16613 207 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 TPTE2P1Q5T6R2 138 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 TMEM78Q5T7P6 136 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 SLC51BQ86UW2 128 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 GON7Q9BXV9 100 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 WDR61Q9GZS3 305 aaKnown RBP6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 SLC45A2Q9UMX9 530 aa6.82□□□□□ -1.32
PTPDC1-201ENST00000288976 A0A0A6YYJ9 748 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 SAP30O75446 220 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 MBP02144 154 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 UCP1P25874 307 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 SUMO1P63165 101 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 SUPT4H1P63272 117 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 DHRS2Q13268 280 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 FA2HQ7L5A8 372 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 C16orf82Q7Z2V1 217 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 LFNGQ8NES3 379 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 OR2T10Q8NGZ9 312 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 RNF5Q99942 180 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 TMED3Q9Y3Q3 217 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 TEP1Q99973 2627 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 IGHV1-69DA0A0B4J2H0 117 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 G3V3Q6 166 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 IGHV1-69P01742 117 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 RD3LP0DJH9 198 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 NPPCP23582 126 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 NUTF2P61970 127 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 PJVKQ0ZLH3 352 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 OR2C3Q8N628 320 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 OR10J6PQ8NGY7 276 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 PRSS3P2Q8NHM4 247 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 SCARB1Q8WTV0 552 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 ATG101Q9BSB4 218 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 CACFD1Q9UGQ2 172 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 FAM157CP0CG43 387 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 BTN1A1Q13410 526 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 C18orf12Q96KH6 178 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 PLEKHA2Q9HB19 425 aa6.81□□□□□ -1.32
PTPDC1-201ENST00000288976 H3BUX3 64 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 OR10J1P30954 320 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 LYZL2Q7Z4W2 148 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 OR5AN1Q8NGI8 311 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 STAB1Q9NY15 2570 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 CENPVL3A0A0U1RRI6 287 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 NPFFO15130 113 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 CD33P20138 364 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 VDAC2P45880 294 aaPredicted RBP6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 OR10G4Q8NGN3 311 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 OR10G9Q8NGN4 311 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 OR10G7Q8NGN6 311 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 RAB40CQ96S21 281 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 SLA2Q9H6Q3 261 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 GAR1Q9NY12 217 aaKnown RBP6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 MAP1LC3B2A6NCE7 125 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 HPRT1P00492 218 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 LINC00869P0C866 280 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 SRSF4Q08170 494 aaKnown RBP6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 UTF1Q5T230 341 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 HSD17B13Q7Z5P4 300 aaPredicted RBP6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 BAP18Q8IXM2 172 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 GLMPQ8WWB7 406 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 LSM10Q969L4 123 aaKnown RBP6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 MAP1LC3BQ9GZQ8 125 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 ARL2-SNX15V9GYD0 113 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 PLXNB1O43157 2135 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 UMAD1C9J7I0 102 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 HYPMO75409 117 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 SNAPINO95295 136 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 PRSS1P07477 247 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 MFAP4P55083 255 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 TCTAP57738 103 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 CLEC19AQ6UXS0 136 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 RSG1Q9BU20 258 aa6.8□□□□□ -1.32
PTPDC1-201ENST00000288976 COL12A1Q99715 3063 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 HELZ2Q9BYK8 2649 aaKnown RBP6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 H0YJW9 148 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 BMPR1BO00238 502 aa6.79□□□□□ -1.32
PTPDC1-201ENST00000288976 CDS2O95674 445 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms