RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 GCGP01275 180 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 SFTPCP11686 197 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 LINC00305Q7Z4B0 112 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 OR1L4Q8NGR5 311 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 VSTM2AQ8TAG5 236 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 FAM222BQ8WU58 562 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 IGFBPL1Q8WX77 278 aa13.02□□□□□ -0.33
SMAD6-201ENST00000288840 C17orf100A8MU93 164 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 C17orf58Q2M2W7 97 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 C22orf34Q6ZV56 151 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 OR4C13Q8NGP0 309 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 ARL2-SNX15V9GYD0 113 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 A0A1W2PN81 502 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 FRMD6-AS1P0C7T7 363 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 MMDQ15546 238 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 PMS2P5A8MQ11 134 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 M0R143 59 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 APCSP02743 223 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 LOXL3P58215 753 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 ARF6P62330 175 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 PRDM13Q9H4Q3 707 aa13.01□□□□□ -0.33
SMAD6-201ENST00000288840 RPUSD1Q9UJJ7 312 aaKnown RBP13.01□□□□□ -0.33
SMAD6-201ENST00000288840 VDAC2P45880 294 aaPredicted RBP13□□□□□ -0.33
SMAD6-201ENST00000288840 RPL27AP46776 148 aaKnown RBP13□□□□□ -0.33
SMAD6-201ENST00000288840 LCN2P80188 198 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 GAFA1Q96PS6 74 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 FBXL15Q9H469 300 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 TMEM106BQ9NUM4 274 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 FAM215AQ9Y5M1 114 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 DLL1O00548 723 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 PRR30Q53SZ7 412 aaPredicted RBP13□□□□□ -0.33
SMAD6-201ENST00000288840 C1orf229Q6ZS94 237 aaPredicted RBP13□□□□□ -0.33
SMAD6-201ENST00000288840 ELOVL5Q9NYP7 299 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 TRBV20OR9-2A0A075B6H5 130 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 LGALS4P56470 323 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 ZCCHC14Q8WYQ9 949 aaKnown RBP13□□□□□ -0.33
SMAD6-201ENST00000288840 SFXN3Q9BWM7 321 aa13□□□□□ -0.33
SMAD6-201ENST00000288840 CD3EP07766 207 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 TMEM183BQ1AE95 376 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 WASHC3Q9Y3C0 194 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 ARHGAP32A7KAX9 2087 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 MUC21A0A0G2JKD1 596 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 MUC21A0A140T8X8 626 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 M0R2Z0 102 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 NUPR1O60356 82 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 BRS3P32247 399 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 MUC21Q5SSG8 566 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 TMEM200BQ69YZ2 307 aa12.99□□□□□ -0.33
SMAD6-201ENST00000288840 ZNF430Q9H8G1 570 aaPredicted RBP12.99□□□□□ -0.33
SMAD6-201ENST00000288840 DPRXA6NFQ7 191 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 PGLYRP4Q96LB8 373 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 NOL4LQ96MY1 436 aaPredicted RBP12.98□□□□□ -0.33
SMAD6-201ENST00000288840 COL8A1P27658 744 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 PRCDQ00LT1 54 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 Q6ZN92 141 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 SLC25A33Q9BSK2 321 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 GNB4Q9HAV0 340 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 LPAR2Q9HBW0 351 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 F2Z2F3 143 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 GGCTO75223 188 aaKnown RBP12.98□□□□□ -0.33
SMAD6-201ENST00000288840 ACTL10Q5JWF8 245 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 CLEC2AQ6UVW9 174 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 C1orf174Q8IYL3 243 aa12.98□□□□□ -0.33
SMAD6-201ENST00000288840 TBL2Q9Y4P3 447 aaKnown RBP12.98□□□□□ -0.33
SMAD6-201ENST00000288840 DOPEY2Q9Y3R5 2298 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 MBD3L4A6NDZ8 208 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-201ENST00000288840 MBD3L3A6NE82 208 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-201ENST00000288840 MBD3L5A6NJ08 208 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-201ENST00000288840 IGLV1-44P01699 117 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 MBD3L2Q8NHZ7 208 aaPredicted RBP12.97□□□□□ -0.33
SMAD6-201ENST00000288840 ACACBO00763 2458 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 CSPG4Q6UVK1 2322 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 CD69Q07108 199 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 ST6GALNAC3Q8NDV1 305 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 FAM57AQ8TBR7 257 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 TXNDC17Q9BRA2 123 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 Q9UFV3 132 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
SMAD6-201ENST00000288840 F2RL2O00254 374 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 HYPMO75409 117 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 IGHV3-23P01764 117 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.33
SMAD6-201ENST00000288840 WDR73Q6P4I2 378 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 TPSG1Q9NRR2 321 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 P01737 135 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 WNT2P09544 360 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 SSBP2P81877 361 aaPredicted RBP12.96□□□□□ -0.33
SMAD6-201ENST00000288840 ADAMTS20P59510 1910 aa12.96□□□□□ -0.33
SMAD6-201ENST00000288840 IGHV1-69-2A0A0G2JMI3 117 aa12.96□□□□□ -0.34
SMAD6-201ENST00000288840 PRRX1P54821 245 aa12.96□□□□□ -0.34
SMAD6-201ENST00000288840 ZNF788Q6ZQV5 615 aa12.96□□□□□ -0.34
SMAD6-201ENST00000288840 PNKDQ8N490 385 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms