RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CD69Q07108 199 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 POU2AF1Q16633 256 aa22.34■■□□□ 1.17
CBX4-201ENST00000269397 AMMECR1Q9Y4X0 333 aaPredicted RBP22.34■■□□□ 1.17
CBX4-201ENST00000269397 ITGB1BP1O14713 200 aa22.33■■□□□ 1.17
CBX4-201ENST00000269397 PLAUP00749 431 aa22.33■■□□□ 1.17
CBX4-201ENST00000269397 KLF3P57682 345 aaPredicted RBP22.33■■□□□ 1.17
CBX4-201ENST00000269397 COX19Q49B96 90 aa22.33■■□□□ 1.17
CBX4-201ENST00000269397 C2orf83Q53S99 150 aa22.33■■□□□ 1.17
CBX4-201ENST00000269397 LHFPL4Q7Z7J7 247 aa22.33■■□□□ 1.17
CBX4-201ENST00000269397 DCAF16Q9NXF7 216 aa22.33■■□□□ 1.17
CBX4-201ENST00000269397 RAI1Q7Z5J4 1906 aaPredicted RBP22.33■■□□□ 1.16
CBX4-201ENST00000269397 RPL8P62917 257 aaKnown RBP22.33■■□□□ 1.16
CBX4-201ENST00000269397 RTL8BQ17RB0 113 aa22.33■■□□□ 1.16
CBX4-201ENST00000269397 HINT1P49773 126 aaPredicted RBP22.32■■□□□ 1.16
CBX4-201ENST00000269397 CAMPP49913 170 aa22.32■■□□□ 1.16
CBX4-201ENST00000269397 A0A1W2PN81 502 aa22.32■■□□□ 1.16
CBX4-201ENST00000269397 REG1BP48304 166 aa22.32■■□□□ 1.16
CBX4-201ENST00000269397 NUP35Q8NFH5 326 aa22.32■■□□□ 1.16
CBX4-201ENST00000269397 CORTO00230 105 aa22.31■■□□□ 1.16
CBX4-201ENST00000269397 Q56UQ5 140 aa22.31■■□□□ 1.16
CBX4-201ENST00000269397 DKK4Q9UBT3 224 aa22.31■■□□□ 1.16
CBX4-201ENST00000269397 GNG5P63218 68 aa22.31■■□□□ 1.16
CBX4-201ENST00000269397 GUCD1Q96NT3 240 aa22.31■■□□□ 1.16
CBX4-201ENST00000269397 HSBP1O75506 76 aa22.3■■□□□ 1.16
CBX4-201ENST00000269397 WT1P19544 449 aaPredicted RBP22.3■■□□□ 1.16
CBX4-201ENST00000269397 STUMQ69YW2 141 aa22.3■■□□□ 1.16
CBX4-201ENST00000269397 NUDT10Q8NFP7 164 aa22.3■■□□□ 1.16
CBX4-201ENST00000269397 NUDT11Q96G61 164 aa22.3■■□□□ 1.16
CBX4-201ENST00000269397 PSMB11A5LHX3 300 aa22.3■■□□□ 1.16
CBX4-201ENST00000269397 CRYABP02511 175 aaKnown RBP22.3■■□□□ 1.16
CBX4-201ENST00000269397 PPP1R14DQ9NXH3 145 aa22.3■■□□□ 1.16
CBX4-201ENST00000269397 RELQ04864 619 aaPredicted RBP22.29■■□□□ 1.16
CBX4-201ENST00000269397 RNASEKQ6P5S7 137 aaKnown RBP22.29■■□□□ 1.16
CBX4-201ENST00000269397 GAFA1Q96PS6 74 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 CEP250Q9BV73 2442 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 SELENOVP59797 346 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 C10orf55Q5SWW7 151 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 EBLN2Q6P2I7 272 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 C19orf35Q6ZS72 473 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 SARAFQ96BY9 339 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 C19orf24Q9BVV8 132 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 COMMD5Q9GZQ3 224 aa22.29■■□□□ 1.16
CBX4-201ENST00000269397 COX7A2P2O60397 106 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 OR1L8Q8NGR8 309 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 HARBI1Q96MB7 349 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 MRPL20Q9BYC9 149 aaKnown RBP22.28■■□□□ 1.16
CBX4-201ENST00000269397 M0R2Z0 102 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 SLC25A48Q6ZT89 311 aaKnown RBP22.28■■□□□ 1.16
CBX4-201ENST00000269397 KIR3DL3Q8N743 410 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 PAXXQ9BUH6 204 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 RNF7Q9UBF6 113 aa22.28■■□□□ 1.16
CBX4-201ENST00000269397 TBR1Q16650 682 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 PNKDQ8N490 385 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 CD24P25063 80 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 TSPOP30536 169 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 PATE2Q6UY27 113 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 ZNF329Q86UD4 541 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 OR5B3Q8NH48 314 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 NPIPB3Q92617 1050 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 MBD6Q96DN6 1003 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 RAB9BQ9NP90 201 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 TP73-AS1Q9UF72 201 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 RPH3ALQ9UNE2 315 aa22.27■■□□□ 1.16
CBX4-201ENST00000269397 FAM181BA6NEQ2 426 aa22.26■■□□□ 1.15
CBX4-201ENST00000269397 HIGD1CA8MV81 97 aa22.26■■□□□ 1.15
CBX4-201ENST00000269397 PEX7O00628 323 aa22.26■■□□□ 1.15
CBX4-201ENST00000269397 UNQ5815/PRO19632Q6UWF5 114 aa22.26■■□□□ 1.15
CBX4-201ENST00000269397 SEM1Q6ZVN7 128 aa22.26■■□□□ 1.15
CBX4-201ENST00000269397 FNDC4Q9H6D8 234 aaPredicted RBP22.26■■□□□ 1.15
CBX4-201ENST00000269397 RPUSD1Q9UJJ7 312 aaKnown RBP22.26■■□□□ 1.15
CBX4-201ENST00000269397 VWC2LB2RUY7 222 aa22.26■■□□□ 1.15
CBX4-201ENST00000269397 REG1AP05451 166 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 PMCHL1Q16048 86 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 C10orf113Q5VZT2 155 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 ZNF841Q6ZN19 808 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 KLHDC1Q8N7A1 406 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 MRPL32Q9BYC8 188 aaKnown RBP22.25■■□□□ 1.15
CBX4-201ENST00000269397 TNFRSF19Q9NS68 423 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 BET1LQ9NYM9 111 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 MRPL36Q9P0J6 103 aaKnown RBP22.25■■□□□ 1.15
CBX4-201ENST00000269397 MRPL27Q9P0M9 148 aaKnown RBP22.25■■□□□ 1.15
CBX4-201ENST00000269397 ABCA1O95477 2261 aa22.25■■□□□ 1.15
CBX4-201ENST00000269397 SH2D7A6NKC9 451 aaPredicted RBP22.24■■□□□ 1.15
CBX4-201ENST00000269397 DLL1O00548 723 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 TNFAIP6P98066 277 aaPredicted RBP22.24■■□□□ 1.15
CBX4-201ENST00000269397 RPRMLQ8N4K4 120 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 NDUFA4L2Q9NRX3 87 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 CLEC5AQ9NY25 188 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 M0QZ24 198 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 SPATA12Q7Z6I5 190 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 FAM222BQ8WU58 562 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 BLNKQ8WV28 456 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 GLRXP35754 106 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 ERHP84090 104 aaKnown RBP22.24■■□□□ 1.15
CBX4-201ENST00000269397 OR2D3Q8NGH3 330 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 GRAMD2BQ96HH9 432 aa22.24■■□□□ 1.15
CBX4-201ENST00000269397 ALKBH7Q9BT30 221 aaPredicted RBP22.24■■□□□ 1.15
CBX4-201ENST00000269397 BDP1A6H8Y1 2624 aa22.23■■□□□ 1.15
CBX4-201ENST00000269397 WT1-ASQ06250 92 aa22.23■■□□□ 1.15
CBX4-201ENST00000269397 CCL25O15444 150 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms