RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 OR10J1P30954 320 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 TMEM116Q8NCL8 245 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 NPIPB3Q92617 1050 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 RAB24Q969Q5 203 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 SLC25A33Q9BSK2 321 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 TMEM231Q9H6L2 316 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 TREM1Q9NP99 234 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 MOB4Q9Y3A3 225 aa12.93□□□□□ -0.34
TPM1-201ENST00000267996 UNC79Q9P2D8 2635 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 A6NDX4 124 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 C9JQL5 133 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 MT-CO2P00403 227 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 FAM122CQ6P4D5 195 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 PBDC1Q9BVG4 233 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 SMDT1Q9H4I9 107 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 SLC25A22Q9H936 323 aa12.92□□□□□ -0.34
TPM1-201ENST00000267996 AMY1AP04745 511 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
TPM1-201ENST00000267996 RND2P52198 227 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 PEA15Q15121 130 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 CYB5R2Q6BCY4 276 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 WFDC11Q8NEX6 87 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 SGMS2Q8NHU3 365 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 PDZD2O15018 2839 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 ZANQ9Y493 2812 aa12.91□□□□□ -0.34
TPM1-201ENST00000267996 RBFOX3A6NFN3 312 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 IGHV3-48P01763 117 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 KLK9Q2XQG4 91 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 C10orf91Q5T1B1 145 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 TMEM219Q86XT9 240 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 NARS2Q96I59 477 aaKnown RBP12.9□□□□□ -0.34
TPM1-201ENST00000267996 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 FOXC2Q99958 501 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 KLK9Q9UKQ9 250 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 CELSR1Q9NYQ6 3014 aa12.9□□□□□ -0.34
TPM1-201ENST00000267996 IGLV11-55A0A075B6I3 123 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 TCRBV4S1A1TA0A5B7 111 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 H3BUX3 64 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 K7EIM0 57 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 DEFA4P12838 97 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
TPM1-201ENST00000267996 ZNF506Q5JVG8 444 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 C9orf139Q6ZV77 190 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 C22orf15Q8WYQ4 148 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 TRGV9Q99603 122 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
TPM1-201ENST00000267996 EIF3GO75821 320 aaKnown RBP eCLIP12.89□□□□□ -0.35
TPM1-201ENST00000267996 ADCYAP1P18509 176 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 SELENOTP62341 195 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 OR4X1Q8NH49 305 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 RARRES2Q99969 163 aa12.89□□□□□ -0.35
TPM1-201ENST00000267996 CCDC168Q8NDH2 2452 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
TPM1-201ENST00000267996 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
TPM1-201ENST00000267996 NANPQ8TBE9 248 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 TMEM68Q96MH6 324 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 PITPNC1Q9UKF7 332 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 CARHSP1Q9Y2V2 147 aaKnown RBP12.88□□□□□ -0.35
TPM1-201ENST00000267996 FASNP49327 2511 aaKnown RBP12.88□□□□□ -0.35
TPM1-201ENST00000267996 ITPR3Q14573 2671 aa12.88□□□□□ -0.35
TPM1-201ENST00000267996 LOC102723971A0A1B0GUV8 181 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 A0A1W2PPV4 95 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 ZFP92A6NM28 416 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 ATP6V0E1O15342 81 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
TPM1-201ENST00000267996 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
TPM1-201ENST00000267996 RHOBP62745 196 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 ICAM4Q14773 271 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 HAGHQ16775 308 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 C16orf82Q7Z2V1 217 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 FAM110DQ8TAY7 271 aaPredicted RBP12.87□□□□□ -0.35
TPM1-201ENST00000267996 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 TNFRSF19Q9NS68 423 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 ITPR2Q14571 2701 aa12.87□□□□□ -0.35
TPM1-201ENST00000267996 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 LINC01548A6NM66 108 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 M0QZK8 103 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 SFTA3P0C7M3 94 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 ZNF90Q03938 601 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 AKIRIN2Q53H80 203 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 CIARTQ8N365 385 aaPredicted RBP12.86□□□□□ -0.35
TPM1-201ENST00000267996 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
TPM1-201ENST00000267996 MDFIC2A0A1B0GVS7 189 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 SH2D7A6NKC9 451 aaPredicted RBP12.86□□□□□ -0.35
TPM1-201ENST00000267996 HSPB1P04792 205 aaKnown RBP12.86□□□□□ -0.35
TPM1-201ENST00000267996 OR5G3P0C626 314 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
TPM1-201ENST00000267996 BCL2P10415 239 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms