RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TMEM136Q6ZRR5 245 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 CDC42EP3Q9UKI2 254 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 ENSAO43768 121 aaKnown RBP13.65□□□□□ -0.22
SQLE-201ENST00000265896 IGHG3P01860 377 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 CCL17Q92583 94 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 NEUROG1Q92886 237 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 COMMD5Q9GZQ3 224 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 TECRQ9NZ01 308 aaKnown RBP13.65□□□□□ -0.22
SQLE-201ENST00000265896 FOXA2Q9Y261 457 aaPredicted RBP13.65□□□□□ -0.22
SQLE-201ENST00000265896 M0R296 226 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 IGHV1-46P01743 117 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 USF1P22415 310 aaPredicted RBP13.65□□□□□ -0.22
SQLE-201ENST00000265896 STUMQ69YW2 141 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
SQLE-201ENST00000265896 ZNF891A8MT65 544 aaPredicted RBP13.64□□□□□ -0.23
SQLE-201ENST00000265896 ISLRO14498 428 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 IGLV2-8P01709 118 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 SELENOTP62341 195 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 FNDC4Q9H6D8 234 aaPredicted RBP13.64□□□□□ -0.23
SQLE-201ENST00000265896 CELSR1Q9NYQ6 3014 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 FOSL1P15407 271 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 AREGP15514 252 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 Q56UQ5 140 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 TXN2Q99757 166 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 MIEN1Q9BRT3 115 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 ZNF586Q9NXT0 402 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 RNF7Q9UBF6 113 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
SQLE-201ENST00000265896 TRAV17A0A0B4J275 112 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 UPK2O00526 184 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 RPLP1P05386 114 aaKnown RBP13.63□□□□□ -0.23
SQLE-201ENST00000265896 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 BRS3P32247 399 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 ZNF137PP52743 207 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 LBHQ53QV2 105 aaPredicted RBP13.63□□□□□ -0.23
SQLE-201ENST00000265896 GDF5OSQ5U4N7 250 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 WFDC8Q8IUA0 241 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 A0A1W2PRD5 423 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 A0A1W2PRF3 423 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 A0A1W2PRM7 423 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 CGB3P0DN86 165 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 CGB7P0DN87 165 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 CX3CL1P78423 397 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 TCF24Q7RTU0 167 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 OR2D3Q8NGH3 330 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 LPAR2Q9HBW0 351 aa13.63□□□□□ -0.23
SQLE-201ENST00000265896 RAI1Q7Z5J4 1906 aaPredicted RBP13.63□□□□□ -0.23
SQLE-201ENST00000265896 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 RNASE2P10153 161 aaKnown RBP13.62□□□□□ -0.23
SQLE-201ENST00000265896 RAB7AP51149 207 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 RNASEKQ6P5S7 137 aaKnown RBP13.62□□□□□ -0.23
SQLE-201ENST00000265896 TEX43Q6ZNM6 134 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 ZNF439Q8NDP4 499 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 SLC25A33Q9BSK2 321 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 ZFHX3Q15911 3703 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 SLC25A17O43808 307 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 HINT1P49773 126 aaPredicted RBP13.62□□□□□ -0.23
SQLE-201ENST00000265896 PRCDQ00LT1 54 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 WT1-ASQ06250 92 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 AARDQ4LEZ3 155 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 PLA2G2CQ5R387 149 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 Q6ZN92 141 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 SLC25A2Q9BXI2 301 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 CLEC5AQ9NY25 188 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 DSCAML1Q8TD84 2053 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 COX7A2P2O60397 106 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 APCSP02743 223 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 PAFAH1B2P68402 229 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 TNXAQ16473 311 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 RTL8BQ17RB0 113 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 Q8N976 141 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 SFXN3Q9BWM7 321 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 SAP30LQ9HAJ7 183 aa13.62□□□□□ -0.23
SQLE-201ENST00000265896 AMMECR1Q9Y4X0 333 aaPredicted RBP13.62□□□□□ -0.23
SQLE-201ENST00000265896 FCN3O75636 299 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 LHBP01229 141 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 C8orf88P0DMB2 117 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 LYPD2Q6UXB3 125 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 OR1B1Q8NGR6 318 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 C11orf52Q96A22 123 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 GOLT1BQ9Y3E0 138 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 FAM215AQ9Y5M1 114 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 TSKUQ8WUA8 353 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 ZNF331Q9NQX6 463 aaPredicted RBP13.61□□□□□ -0.23
SQLE-201ENST00000265896 RALYQ9UKM9 306 aaKnown RBP13.61□□□□□ -0.23
SQLE-201ENST00000265896 PRNDQ9UKY0 176 aa13.61□□□□□ -0.23
SQLE-201ENST00000265896 C9JCJ5 164 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 ZNF138P52744 262 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 STPG4Q8N801 248 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 OR10X1Q8NGY0 326 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 TMEM167BQ9NRX6 74 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 TRAV8-1A0A0A6YYK1 113 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 TCF21O43680 179 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 TMEM249Q2WGJ8 235 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 PATE2Q6UY27 113 aa13.6□□□□□ -0.23
SQLE-201ENST00000265896 VWC2LB2RUY7 222 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 FTH1P19P0C7X4 201 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms