RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TREML4Q6UXN2 200 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 ZNF808Q8N4W9 903 aaPredicted RBP7.21□□□□□ -1.26
VAPB-201ENST00000265619 TPRX1Q8N7U7 411 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 RAB1CQ92928 201 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 C10orf35Q96D05 121 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 ZNF355PQ9NSJ1 428 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 WDR83OSQ9Y284 106 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 LSM4Q9Y4Z0 139 aaKnown RBP7.21□□□□□ -1.26
VAPB-201ENST00000265619 COL5A1P20908 1838 aaPredicted RBP7.21□□□□□ -1.26
VAPB-201ENST00000265619 TRAV24A0A0B4J272 114 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 hCG_38984A0A1B0GV85 526 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 HELTA6NFD8 242 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 C21orf140B9A014 251 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 FTH1P19P0C7X4 201 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 FGF6P10767 208 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 CR1LQ2VPA4 569 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 IBA57Q5T440 356 aaKnown RBP7.21□□□□□ -1.26
VAPB-201ENST00000265619 ABHD17BQ5VST6 288 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 PPP1R32Q7Z5V6 425 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 MBD6Q96DN6 1003 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 OXGR1Q96P68 337 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 MS4A5Q9H3V2 200 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 PIEZO1Q92508 2521 aa7.21□□□□□ -1.26
VAPB-201ENST00000265619 IGLV3-12A0A075B6K2 115 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 C17orf98A8MV24 154 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 OR10J4P0C629 311 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 P0C879 139 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 FCGR2BP31994 310 aaPredicted RBP7.2□□□□□ -1.26
VAPB-201ENST00000265619 HOXA4Q00056 320 aaPredicted RBP7.2□□□□□ -1.26
VAPB-201ENST00000265619 SH2D6Q7Z4S9 175 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 FAM169BQ8N8A8 192 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 LRRC29Q8WV35 223 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 C11orf52Q96A22 123 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 GGTLC1Q9BX51 225 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 IGHV3-64DA0A0J9YX35 117 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 TRAPPC2LH3BP13 241 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 K7EQM0 130 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 CDIPTO14735 213 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 CXorf1O96002 111 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 HLA-DRB1P01911 266 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 ADH4P08319 380 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 HERV-K104P63124 156 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 Q0VFX4 171 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 WFDC2Q14508 124 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 PIP4P2Q8N4L2 257 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 TMEM251Q8N6I4 163 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 ATMQ13315 3056 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 KIR2DS1A0A191URI9 304 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 A0A1W2PPM0 123 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 IZUMO1RA6ND01 250 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 H3BRM9 83 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 RFPL3SP0C7P2 107 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 SCGB1A1P11684 91 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 CCL2P13500 99 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 KIR2DS4P43632 304 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 KLF5Q13887 457 aaPredicted RBP7.2□□□□□ -1.26
VAPB-201ENST00000265619 KIR2DS1Q14954 304 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 PSG3Q16557 428 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 ADAMTSL5Q6ZMM2 481 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 SPTSSAQ969W0 71 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 PKIBQ9C010 78 aa7.2□□□□□ -1.26
VAPB-201ENST00000265619 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
VAPB-201ENST00000265619 ZNF331Q9NQX6 463 aaPredicted RBP7.2□□□□□ -1.26
VAPB-201ENST00000265619 A0A1W2PRE2 83 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 PSMB11A5LHX3 300 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 NKX2-8O15522 239 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 LEPROTL1O95214 131 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 COX8AP10176 69 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 FER1L6-AS2Q96M78 137 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 C1QTNF5Q9BXJ0 243 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 GGTLC3B5MD39 225 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.19□□□□□ -1.26
VAPB-201ENST00000265619 DHHO43323 396 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 B4GALT1P15291 398 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 CYB561P49447 251 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 EFNB3Q15768 340 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 TMEM249Q2WGJ8 235 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 CD300EQ496F6 205 aaPredicted RBP7.19□□□□□ -1.26
VAPB-201ENST00000265619 BPIFA4PQ86YQ2 179 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 VSTM2AQ8TAG5 236 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 ZNF503Q96F45 646 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 AP1S3Q96PC3 154 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 OSTCQ9NRP0 149 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 K7ERJ3 54 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 HBZP02008 142 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 ZNF32P17041 273 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 PEAR1Q5VY43 1037 aaPredicted RBP7.19□□□□□ -1.26
VAPB-201ENST00000265619 PRRG4Q9BZD6 226 aa7.19□□□□□ -1.26
VAPB-201ENST00000265619 CNIH1O95406 144 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 FGF12P61328 243 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 ALKBH6Q3KRA9 238 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 PLA2G2CQ5R387 149 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 SPSB4Q96A44 273 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 IGF2BP2-AS1Q96M15 143 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 SPAG8Q99932 426 aaPredicted RBP7.18□□□□□ -1.26
VAPB-201ENST00000265619 DEFB127Q9H1M4 99 aa7.18□□□□□ -1.26
VAPB-201ENST00000265619 CHCHD2Q9Y6H1 151 aaPredicted RBP7.18□□□□□ -1.26
VAPB-201ENST00000265619 SPTBN1Q01082 2364 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms