RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 HIST2H2BDQ6DRA6 164 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 SPSB3Q6PJ21 355 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 C8orf86Q6ZUL3 223 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 MISP3Q96FF7 219 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 ZNF414Q96IQ9 312 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 GGACTQ9BVM4 153 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 LSM5Q9Y4Y9 91 aaKnown RBP10.98□□□□□ -0.65
SSBP1-201ENST00000265304 SORL1Q92673 2214 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 NOTCH1P46531 2555 aa10.98□□□□□ -0.65
SSBP1-201ENST00000265304 DNHD1Q96M86 4753 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 TRAV14DV4A0A0A6YYC5 116 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 M0QZ24 198 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 BMPR1BO00238 502 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 IGHV3-11P01762 117 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 IFNA4P05014 189 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 CLEC3BP05452 202 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 PET100P0DJ07 73 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 ADMP35318 185 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 DEFA5Q01523 94 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 FGL1Q08830 312 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 HAPLN4Q86UW8 402 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 TMEM252Q8N6L7 170 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 OR1N2Q8NGR9 330 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 BSCL2Q96G97 398 aaPredicted RBP10.97□□□□□ -0.65
SSBP1-201ENST00000265304 OR5AC2Q9NZP5 309 aa10.97□□□□□ -0.65
SSBP1-201ENST00000265304 MRPL36Q9P0J6 103 aaKnown RBP10.97□□□□□ -0.65
SSBP1-201ENST00000265304 CMYA5Q8N3K9 4069 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 L7N2F9 121 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 CLN5O75503 358 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 TRBV12-3P01733 135 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 OR8U8P0C7N1 319 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 ZP3P21754 424 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 NPBWR1P48145 328 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 VAMP2P63027 116 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 DLK1P80370 383 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 KLF5Q13887 457 aaPredicted RBP10.96□□□□□ -0.65
SSBP1-201ENST00000265304 GAMTQ14353 236 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 NSUN5P1Q3KNT7 163 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 PRR31Q5SQ13 230 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 GPHB5Q86YW7 130 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 OR11H1Q8NG94 326 aa10.96□□□□□ -0.65
SSBP1-201ENST00000265304 IGHV4OR15-8A0A075B7B6 117 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 TRAV30A0A087WSZ9 112 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 A0A087WW49 117 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 NUDT19A8MXV4 375 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 LINC01619G3V211 115 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 H3BP45 60 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 TGOLN2O43493 480 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 GGCTO75223 188 aaKnown RBP10.95□□□□□ -0.66
SSBP1-201ENST00000265304 OPRK1P41145 380 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 SULT1A1P50225 295 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 S100A10P60903 97 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 VWC2Q2TAL6 325 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 Q5BKY6 102 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 KHDC1LQ5JSQ8 128 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 LINC00482Q8N8I6 264 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 ST6GAL2Q96JF0 529 aa10.95□□□□□ -0.66
SSBP1-201ENST00000265304 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 IGSF23A1L1A6 192 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 FAM24AA6NFZ4 105 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 LGALS9O00182 355 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 IGKV1-17P01599 117 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 METTL15P1P0C7V9 234 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 IGLC1P0CG04 106 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 BCAP31P51572 246 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 BAXQ07812 192 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 SLC16A13Q7RTY0 426 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 OR10P1Q8NGE3 313 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 OR2T35Q8NGX2 323 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 PINX1Q96BK5 328 aaKnown RBP10.94□□□□□ -0.66
SSBP1-201ENST00000265304 OR5B12Q96R08 314 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 CHRDL1Q9BU40 450 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 SLC25A31Q9H0C2 315 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 MBD2Q9UBB5 411 aa10.94□□□□□ -0.66
SSBP1-201ENST00000265304 CCNKO75909 580 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 TSPAN15O95858 294 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 HOXD3P31249 432 aaPredicted RBP10.93□□□□□ -0.66
SSBP1-201ENST00000265304 S100A11P31949 105 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 GPR183P32249 361 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 CAV2P51636 162 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 YPEL3P61236 119 aaPredicted RBP10.93□□□□□ -0.66
SSBP1-201ENST00000265304 ATP6V1FQ16864 119 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 LRRC37A5PQ49AS3 106 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 THAP6Q8TBB0 222 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 DPF1Q92782 380 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 AQP10Q96PS8 301 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
SSBP1-201ENST00000265304 S4R3C0 116 aa10.93□□□□□ -0.66
SSBP1-201ENST00000265304 IGKV1D-37A0A075B6S9 117 aa10.92□□□□□ -0.66
SSBP1-201ENST00000265304 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
SSBP1-201ENST00000265304 IGHV3-21A0A0B4J1V1 117 aa10.92□□□□□ -0.66
SSBP1-201ENST00000265304 A0A1B0GVG6 124 aa10.92□□□□□ -0.66
SSBP1-201ENST00000265304 ANKRD34BA5PLL1 514 aa10.92□□□□□ -0.66
SSBP1-201ENST00000265304 IGHV3-48P01763 117 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms