RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 TMEM186Q96B77 213 aa12.25□□□□□ -0.45
XRCC1-201ENST00000262887 SNRNP40Q96DI7 357 aaKnown RBP12.25□□□□□ -0.45
XRCC1-201ENST00000262887 URB1-AS1Q96HZ7 61 aa12.25□□□□□ -0.45
XRCC1-201ENST00000262887 LINC00479Q96M42 142 aa12.25□□□□□ -0.45
XRCC1-201ENST00000262887 CXXC4Q9H2H0 198 aa12.25□□□□□ -0.45
XRCC1-201ENST00000262887 DUSP13Q9UII6 198 aa12.25□□□□□ -0.45
XRCC1-201ENST00000262887 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
XRCC1-201ENST00000262887 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
XRCC1-201ENST00000262887 SYS1-DBNDD2H3BUS1 97 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
XRCC1-201ENST00000262887 KIR2DS2P43631 304 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 SAMD13Q5VXD3 122 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 DEFB123Q8N688 67 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 GUCD1Q96NT3 240 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 TMEM14BQ9NUH8 114 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 FOXA2Q9Y261 457 aaPredicted RBP12.24□□□□□ -0.45
XRCC1-201ENST00000262887 K7ESF4 209 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 MYOD1P15172 320 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 CXCL12P48061 93 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 ZNF134P52741 427 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 ABHD17BQ5VST6 288 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 IFI27L2Q9H2X8 130 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 FAM186AA6NE01 2351 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 IGKV1OR2-108A0A075B7D4 117 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 GOSR1O95249 250 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 FAM90A1Q86YD7 464 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 CD177Q8N6Q3 437 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 C19orf24Q9BVV8 132 aa12.24□□□□□ -0.45
XRCC1-201ENST00000262887 CD5LO43866 347 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 C8orf88P0DMB2 117 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 REG1BP48304 166 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 CT55Q8WUE5 264 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 UBE2L3P68036 154 aaKnown RBP12.23□□□□□ -0.45
XRCC1-201ENST00000262887 PET117Q6UWS5 81 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 TMEM191AQ9H0A3 160 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 DNAJC13O75165 2243 aa12.23□□□□□ -0.45
XRCC1-201ENST00000262887 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 LINC00173Q6ZV60 143 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 DDB2Q92466 427 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 SLC25A33Q9BSK2 321 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 CHRDL1Q9BU40 450 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 TMEM265A0A087WTH1 108 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 LEPROTL1O95214 131 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 CFIP05156 583 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 PRDX2P32119 198 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 ATP5L2Q7Z4Y8 100 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 SCRT2Q9NQ03 307 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 IDI2-AS1Q9NZ38 188 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 AMMECR1Q9Y4X0 333 aaPredicted RBP12.22□□□□□ -0.45
XRCC1-201ENST00000262887 OR51B2Q9Y5P1 312 aa12.22□□□□□ -0.45
XRCC1-201ENST00000262887 PCSK5Q92824 1860 aa12.21□□□□□ -0.45
XRCC1-201ENST00000262887 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
XRCC1-201ENST00000262887 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
XRCC1-201ENST00000262887 TIMM8AO60220 97 aaPredicted RBP12.21□□□□□ -0.45
XRCC1-201ENST00000262887 CER1O95813 267 aa12.21□□□□□ -0.45
XRCC1-201ENST00000262887 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
XRCC1-201ENST00000262887 C1orf229Q6ZS94 237 aaPredicted RBP12.21□□□□□ -0.45
XRCC1-201ENST00000262887 PEF1Q9UBV8 284 aaKnown RBP12.21□□□□□ -0.45
XRCC1-201ENST00000262887 DOCK10Q96BY6 2186 aa12.21□□□□□ -0.45
XRCC1-201ENST00000262887 PRR31Q5SQ13 230 aa12.21□□□□□ -0.46
XRCC1-201ENST00000262887 LRRC29Q8WV35 223 aa12.21□□□□□ -0.46
XRCC1-201ENST00000262887 LEAP2Q969E1 77 aa12.21□□□□□ -0.46
XRCC1-201ENST00000262887 CHCHD1Q96BP2 118 aaKnown RBP12.21□□□□□ -0.46
XRCC1-201ENST00000262887 SMPXQ9UHP9 88 aa12.21□□□□□ -0.46
XRCC1-201ENST00000262887 FZR1Q9UM11 496 aa12.21□□□□□ -0.46
XRCC1-201ENST00000262887 A0A1B0GXF2 115 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 GNG7O60262 68 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 LYZL6O75951 148 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 HLA-DRB1P01911 266 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 HIST1H1EP10412 219 aaKnown RBP12.2□□□□□ -0.46
XRCC1-201ENST00000262887 LOXL3P58215 753 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 HIST1H1AQ02539 215 aaPredicted RBP12.2□□□□□ -0.46
XRCC1-201ENST00000262887 OR1B1Q8NGR6 318 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 TRAV5A0A0B4J249 113 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 LINC00696Q6ZRV3 163 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 OR1N2Q8NGR9 330 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 OR9G1Q8NH87 305 aa12.2□□□□□ -0.46
XRCC1-201ENST00000262887 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 FOXA3P55318 350 aaPredicted RBP12.19□□□□□ -0.46
XRCC1-201ENST00000262887 MORN5Q5VZ52 161 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 C6orf15Q6UXA7 325 aaPredicted RBP12.19□□□□□ -0.46
XRCC1-201ENST00000262887 ZNF841Q6ZN19 808 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 SLC25A2Q9BXI2 301 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 MRPL32Q9BYC8 188 aaKnown RBP12.19□□□□□ -0.46
XRCC1-201ENST00000262887 NBEAQ8NFP9 2946 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 A0A087X0K7 114 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 A6NJY4 79 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 PEX7O00628 323 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 HBBP68871 147 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 FAM167A-AS1Q96KT0 104 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 ABI3Q9P2A4 366 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 PPIAL4GP0DN37 164 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 MLANAQ16655 118 aa12.19□□□□□ -0.46
XRCC1-201ENST00000262887 A0A1B0GV72 72 aa12.18□□□□□ -0.46
XRCC1-201ENST00000262887 SAA2P0DJI9 122 aaPredicted RBP12.18□□□□□ -0.46
XRCC1-201ENST00000262887 SCGB1A1P11684 91 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms