RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 YPEL1O60688 119 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM95Q3KNT9 176 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF324BQ6AW86 544 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM219Q86XT9 240 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 ORMDL3Q8N138 153 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 YPEL2Q96QA6 119 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-201ENST00000261037 MLNRO43193 412 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 FOXG1P55316 489 aaPredicted RBP10.06□□□□□ -0.8
COL8A1-201ENST00000261037 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 IGHV1-46P01743 117 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 C1QL4Q86Z23 238 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 SLC25A28Q96A46 364 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 PRSS22Q9GZN4 317 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF600Q6ZNG1 722 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 WFDC1Q9HC57 220 aa10.06□□□□□ -0.8
COL8A1-201ENST00000261037 PEF1Q9UBV8 284 aaKnown RBP10.06□□□□□ -0.8
COL8A1-201ENST00000261037 IGKV1D-8A0A087WSZ0 117 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 LYPD3O95274 346 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 BTCP35070 178 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 RNF126Q9BV68 326 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 CARHSP1Q9Y2V2 147 aaKnown RBP10.05□□□□□ -0.8
COL8A1-201ENST00000261037 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 JMJD8Q96S16 334 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 SERF1AO75920 110 aa10.05□□□□□ -0.8
COL8A1-201ENST00000261037 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 SELLP14151 372 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF415Q09FC8 603 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 CABIN1Q9Y6J0 2220 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 SBF1O95248 1867 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 CA1P00915 261 aaPredicted RBP10.04□□□□□ -0.8
COL8A1-201ENST00000261037 LINC00614P0C842 121 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 PAQR4Q8N4S7 273 aaPredicted RBP10.04□□□□□ -0.8
COL8A1-201ENST00000261037 EPDR1Q9UM22 224 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 IGLV3-12A0A075B6K2 115 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
COL8A1-201ENST00000261037 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
COL8A1-201ENST00000261037 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
COL8A1-201ENST00000261037 RBMY1A1P0DJD3 496 aaKnown RBP10.04□□□□□ -0.8
COL8A1-201ENST00000261037 RBMY1CP0DJD4 496 aa10.04□□□□□ -0.8
COL8A1-201ENST00000261037 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
COL8A1-201ENST00000261037 LOC102723996A0A087X1L8 192 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 TRGV4A0A0C4DH28 118 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 FABP5P3A8MUU1 101 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
COL8A1-201ENST00000261037 PSMG4Q5JS54 123 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 PVRIGQ6DKI7 326 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 CHD5Q8TDI0 1954 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 GZMBP10144 247 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 FXYD7P58549 80 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 CFHR1Q03591 330 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 GFI1Q99684 422 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 RP1L1Q8IWN7 2480 aaPredicted RBP10.03□□□□□ -0.8
COL8A1-201ENST00000261037 RPL15P61313 204 aaKnown RBP10.03□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 NYNRINQ9P2P1 1898 aaKnown RBP10.03□□□□□ -0.8
COL8A1-201ENST00000261037 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 PSG8Q9UQ74 426 aa10.03□□□□□ -0.8
COL8A1-201ENST00000261037 CD59P13987 128 aa10.02□□□□□ -0.8
COL8A1-201ENST00000261037 MYOD1P15172 320 aa10.02□□□□□ -0.8
COL8A1-201ENST00000261037 NPC2P61916 151 aa10.02□□□□□ -0.8
COL8A1-201ENST00000261037 ZNF362Q5T0B9 420 aaPredicted RBP10.02□□□□□ -0.8
COL8A1-201ENST00000261037 SIGLEC15Q6ZMC9 328 aa10.02□□□□□ -0.8
COL8A1-201ENST00000261037 VCX2Q9H322 139 aa10.02□□□□□ -0.8
COL8A1-201ENST00000261037 SPATA31B1PQ5VZV4 182 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 LINC00271P0C7V0 271 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 ZFP36L1Q07352 338 aaKnown RBP10.02□□□□□ -0.81
COL8A1-201ENST00000261037 C5orf24Q7Z6I8 188 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 FAM169BQ8N8A8 192 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 NEUROG1Q92886 237 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 SLC50A1Q9BRV3 221 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 SPCS1Q9Y6A9 102 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 CD28P10747 220 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 DUTP33316 252 aaKnown RBP10.02□□□□□ -0.81
COL8A1-201ENST00000261037 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
COL8A1-201ENST00000261037 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 A0A1B0GV72 72 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 CCL20P78556 96 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 PAX8Q06710 450 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 NRN1Q9NPD7 142 aa10.02□□□□□ -0.81
COL8A1-201ENST00000261037 A0A1B0GW15 77 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 WNT2P09544 360 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 CCL1P22362 96 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 SRSF6Q13247 344 aaKnown RBP10.01□□□□□ -0.81
COL8A1-201ENST00000261037 GTSCR1Q86UQ5 136 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 COQ2Q96H96 371 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 IGKV1-12A0A0C4DH73 117 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 SAP30O75446 220 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms