RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 IGHV4-38-2P0DP08 117 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 GPX4P36969 197 aaPredicted RBP17.77■□□□□ 0.44
SIX3-201ENST00000260653 FLI1Q01543 452 aaPredicted RBP17.77■□□□□ 0.44
SIX3-201ENST00000260653 FXYD3Q14802 87 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 PEA15Q15121 130 aa17.77■□□□□ 0.44
SIX3-201ENST00000260653 CTXND1A0A1B0GTU2 59 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 RBFOX3A6NFN3 312 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 BRS3P32247 399 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 RAB31Q13636 194 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 ABHD5Q8WTS1 349 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 RAB24Q969Q5 203 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 MISP3Q96FF7 219 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 SLC35E1Q96K37 410 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 BEX4Q9NWD9 120 aaPredicted RBP17.76■□□□□ 0.43
SIX3-201ENST00000260653 DEFA5Q01523 94 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 MAPK1IP1LQ8NDC0 245 aa17.76■□□□□ 0.43
SIX3-201ENST00000260653 ACTR3CQ9C0K3 210 aaPredicted RBP17.76■□□□□ 0.43
SIX3-201ENST00000260653 PVRIGQ6DKI7 326 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 OR1P1Q8NH06 330 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 KCNIP2Q9NS61 270 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 MRPL36Q9P0J6 103 aaKnown RBP17.75■□□□□ 0.43
SIX3-201ENST00000260653 GNG13Q9P2W3 67 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 DMRT1Q9Y5R6 373 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 F11RQ9Y624 299 aaKnown RBP17.75■□□□□ 0.43
SIX3-201ENST00000260653 CSPG4Q6UVK1 2322 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 BTN1A1Q13410 526 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 C10orf91Q5T1B1 145 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 PSMG3-AS1Q96PY0 264 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 GSN-AS1Q9NRJ2 163 aa17.75■□□□□ 0.43
SIX3-201ENST00000260653 CYB5BO43169 146 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 SOX15O60248 233 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 OR10J1P30954 320 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 RPL29P47914 159 aaKnown RBP17.74■□□□□ 0.43
SIX3-201ENST00000260653 CDC34P49427 236 aaPredicted RBP17.74■□□□□ 0.43
SIX3-201ENST00000260653 SEC11CQ9BY50 192 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 CREBBPQ92793 2442 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 CX3CL1P78423 397 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 PRR20EP86478 221 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 PRR20CP86479 221 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 PRR20DP86480 221 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 PRR20BP86481 221 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 PRR20AP86496 221 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 NDPQ00604 133 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 GUCA2BQ16661 112 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 SLC45A2Q9UMX9 530 aa17.74■□□□□ 0.43
SIX3-201ENST00000260653 ZFP92A6NM28 416 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 GATA2P23769 480 aaPredicted RBP17.73■□□□□ 0.43
SIX3-201ENST00000260653 Q8N9W7 124 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 CARHSP1Q9Y2V2 147 aaKnown RBP17.73■□□□□ 0.43
SIX3-201ENST00000260653 A0A0U1RQK1 487 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 SEC14L6B5MCN3 397 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 ATRAIDQ6UW56 229 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 ZNF562Q6V9R5 426 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 NPIPB3Q92617 1050 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 SRSF8Q9BRL6 282 aaKnown RBP17.73■□□□□ 0.43
SIX3-201ENST00000260653 TMPRSS5Q9H3S3 457 aa17.73■□□□□ 0.43
SIX3-201ENST00000260653 RNF223E7ERA6 249 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 AVPP01185 164 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 LINC00869P0C866 280 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 ICAM4Q14773 271 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 Q5PR19 223 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 IGHV3-21A0A0B4J1V1 117 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 ARPC1AQ92747 370 aa17.72■□□□□ 0.43
SIX3-201ENST00000260653 SOX21Q9Y651 276 aaPredicted RBP17.72■□□□□ 0.43
SIX3-201ENST00000260653 RND2P52198 227 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 ZNF506Q5JVG8 444 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 LRRC75A-AS1Q8N1F1 130 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 LINC01356Q8N9X3 169 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 RXFP4Q8TDU9 374 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 SLC25A33Q9BSK2 321 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 WNT10AQ9GZT5 417 aa17.71■□□□□ 0.43
SIX3-201ENST00000260653 LOC102723971A0A1B0GUV8 181 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 A0A1W2PPV4 95 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 CRYGCP07315 174 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 SLC35B3Q9H1N7 401 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 C1RLQ9NZP8 487 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 FBP1P09467 338 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 BCL2P10415 239 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 KLF17Q5JT82 389 aaPredicted RBP17.7■□□□□ 0.42
SIX3-201ENST00000260653 CR1P17927 2039 aa17.7■□□□□ 0.42
SIX3-201ENST00000260653 MT-CO2P00403 227 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 GATA3P23771 443 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 ASPHD1Q5U4P2 390 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 SEPSECSQ9HD40 501 aaKnown RBP17.69■□□□□ 0.42
SIX3-201ENST00000260653 GCN1Q92616 2671 aaKnown RBP17.69■□□□□ 0.42
SIX3-201ENST00000260653 IGKV1D-37A0A075B6S9 117 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 IGHV7-81A0A0B4J1V7 117 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 CORTO00230 105 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 LOXL1Q08397 574 aaPredicted RBP17.69■□□□□ 0.42
SIX3-201ENST00000260653 ETFRF1Q6IPR1 90 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 SVBPQ8N300 66 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 SMDT1Q9H4I9 107 aa17.69■□□□□ 0.42
SIX3-201ENST00000260653 KHDC3LQ587J8 217 aa17.68■□□□□ 0.42
SIX3-201ENST00000260653 SPATA31B1PQ5VZV4 182 aa17.68■□□□□ 0.42
SIX3-201ENST00000260653 CYP2G1PQ6ZSU1 146 aa17.68■□□□□ 0.42
SIX3-201ENST00000260653 THAP8Q8NA92 274 aa17.68■□□□□ 0.42
SIX3-201ENST00000260653 HSPB9Q9BQS6 159 aa17.68■□□□□ 0.42
SIX3-201ENST00000260653 HLA-DRB1P01911 266 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 ZNF90Q03938 601 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 TMEM219Q86XT9 240 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms