RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 FAM90A12PA8MX19 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 FAM90A5PA8MXJ8 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 FAM90A23PA8MXZ1 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 FAM90A15PP0C7V4 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 FAM90A13PP0C7W8 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 FAM90A14PP0C7W9 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 FAM90A24PP0C7X0 464 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 PSG7Q13046 419 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 MRPL14Q6P1L8 145 aaKnown RBP12.35□□□□□ -0.43
KCTD3-201ENST00000259154 TMEM108Q6UXF1 575 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 ADTRPQ96IZ2 230 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 GGTLC1Q9BX51 225 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
KCTD3-201ENST00000259154 RIPPLY2Q5TAB7 128 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 BHLHA15Q7RTS1 189 aaPredicted RBP12.34□□□□□ -0.43
KCTD3-201ENST00000259154 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 SARAFQ96BY9 339 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 WDR83OSQ9Y284 106 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 IGLV3-12A0A075B6K2 115 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 IGHV3OR16-13A0A075B7E8 117 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 IGHV3-74A0A0B4J1X5 117 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 H7C2G1 150 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 KLK10O43240 276 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
KCTD3-201ENST00000259154 COX19Q49B96 90 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 RNASEH2CQ8TDP1 164 aaKnown RBP12.34□□□□□ -0.43
KCTD3-201ENST00000259154 C1QTNF5Q9BXJ0 243 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 DMXL1Q9Y485 3027 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 CCL25O15444 150 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
KCTD3-201ENST00000259154 ADH4P08319 380 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 COL8A2P25067 703 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 LMO1P25800 156 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 C10orf55Q5SWW7 151 aa12.34□□□□□ -0.43
KCTD3-201ENST00000259154 ZCCHC24Q8N2G6 241 aaKnown RBP12.34□□□□□ -0.43
KCTD3-201ENST00000259154 CIDEAO60543 219 aa12.33□□□□□ -0.43
KCTD3-201ENST00000259154 FABP2P12104 132 aa12.33□□□□□ -0.43
KCTD3-201ENST00000259154 CTSSP25774 331 aa12.33□□□□□ -0.43
KCTD3-201ENST00000259154 PINLYPA6NC86 204 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 TBR1Q16650 682 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 MBNL2Q5VZF2 373 aaKnown RBP12.33□□□□□ -0.44
KCTD3-201ENST00000259154 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 ITLN1Q8WWA0 313 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 GTSF1LQ9H1H1 148 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 ATMQ13315 3056 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 A0A1W2PS18 150 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 TMEM210A6NLX4 147 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 NKX2-8O15522 239 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 MED12LQ86YW9 2145 aa12.33□□□□□ -0.44
KCTD3-201ENST00000259154 FOXL1Q12952 345 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 PEF1Q9UBV8 284 aaKnown RBP12.32□□□□□ -0.44
KCTD3-201ENST00000259154 TRAV8-1A0A0A6YYK1 113 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 FOXF2Q12947 444 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 LINC00305Q7Z4B0 112 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 MGST2Q99735 147 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 PRNDQ9UKY0 176 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 ZNF716A6NP11 495 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 NCBP2LA6PVI3 153 aaKnown RBP12.32□□□□□ -0.44
KCTD3-201ENST00000259154 Q1RN00 199 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 OR4F17Q8NGA8 305 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 ZNRD1Q9P1U0 126 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 SPCS1Q9Y6A9 102 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
KCTD3-201ENST00000259154 IGLC2P0DOY2 106 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 RPL7P18124 248 aaKnown RBP12.31□□□□□ -0.44
KCTD3-201ENST00000259154 NPPCP23582 126 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 VMA21Q3ZAQ7 101 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 CRIP3Q6Q6R5 217 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 TMEM105Q8N8V8 129 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 OR1L8Q8NGR8 309 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 GP6Q9HCN6 339 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 TNFRSF19Q9NS68 423 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 DNLZQ5SXM8 178 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 DMXL2Q8TDJ6 3036 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 TRAV17A0A0B4J275 112 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 HBBP68871 147 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 TSKUQ8WUA8 353 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
KCTD3-201ENST00000259154 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 CKS2P33552 79 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 RELQ04864 619 aaPredicted RBP12.31□□□□□ -0.44
KCTD3-201ENST00000259154 SLC25A53Q5H9E4 307 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 FADS6Q8N9I5 356 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 ANAPC10Q9UM13 185 aa12.31□□□□□ -0.44
KCTD3-201ENST00000259154 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 STAG3L2P0CL84 134 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 STAG3L3P0CL85 134 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 TWIST1Q15672 202 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 TXNDC17Q9BRA2 123 aa12.3□□□□□ -0.44
KCTD3-201ENST00000259154 AAMDCQ9H7C9 122 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms