RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 C19orf24Q9BVV8 132 aa17.38■□□□□ 0.37
CLN6-201ENST00000249806 CDX1P47902 265 aaPredicted RBP17.37■□□□□ 0.37
CLN6-201ENST00000249806 LGALS4P56470 323 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 OR4X1Q8NH49 305 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 TMEM167BQ9NRX6 74 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 A0A1W2PPR1 153 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 TGOLN2O43493 480 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 S100A9P06702 114 aaKnown RBP17.37■□□□□ 0.37
CLN6-201ENST00000249806 RPL27AP46776 148 aaKnown RBP17.37■□□□□ 0.37
CLN6-201ENST00000249806 PQLC2Q6ZP29 291 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 OR2T10Q8NGZ9 312 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 MISP3Q96FF7 219 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 TIMD4Q96H15 378 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 SFRP2Q96HF1 295 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 UHRF2Q96PU4 802 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 FBXL15Q9H469 300 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 DNAJC4Q9NNZ3 241 aa17.37■□□□□ 0.37
CLN6-201ENST00000249806 PPP5D1E7EU14 171 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 LY6LH3BQJ8 138 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 C8orf88P0DMB2 117 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 PPP1R27Q86WC6 154 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 IGFBPL1Q8WX77 278 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 SMIM6P0DI80 62 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 SRP14P37108 136 aaKnown RBP17.36■□□□□ 0.37
CLN6-201ENST00000249806 TAS2R45P59539 299 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 PDZD11Q5EBL8 140 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 C11orf52Q96A22 123 aa17.36■□□□□ 0.37
CLN6-201ENST00000249806 IGHV3-21A0A0B4J1V1 117 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 TCRBV4S1A1TA0A5B7 111 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 FCN1O00602 326 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 GGCTO75223 188 aaKnown RBP17.35■□□□□ 0.37
CLN6-201ENST00000249806 CD99P14209 185 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 CRYBB3P26998 211 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 COMPP49747 757 aaPredicted RBP17.35■□□□□ 0.37
CLN6-201ENST00000249806 PATE2Q6UY27 113 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 FAM167A-AS1Q96KT0 104 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 TCEAL7Q9BRU2 100 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 SLC25A2Q9BXI2 301 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 MED13LQ71F56 2210 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 K7EN84 100 aa17.35■□□□□ 0.37
CLN6-201ENST00000249806 AMMECR1Q9Y4X0 333 aaPredicted RBP17.35■□□□□ 0.37
CLN6-201ENST00000249806 THAP8Q8NA92 274 aa17.34■□□□□ 0.37
CLN6-201ENST00000249806 MDFIC2A0A1B0GVS7 189 aa17.33■□□□□ 0.37
CLN6-201ENST00000249806 GGTLC3B5MD39 225 aa17.33■□□□□ 0.37
CLN6-201ENST00000249806 COX7A2P2O60397 106 aa17.33■□□□□ 0.37
CLN6-201ENST00000249806 SUMO1P63165 101 aaKnown RBP17.33■□□□□ 0.37
CLN6-201ENST00000249806 KCNIP4Q6PIL6 250 aa17.33■□□□□ 0.37
CLN6-201ENST00000249806 NEU4Q8WWR8 484 aaPredicted RBP17.33■□□□□ 0.37
CLN6-201ENST00000249806 GPR61Q9BZJ8 451 aa17.33■□□□□ 0.37
CLN6-201ENST00000249806 HILPDAQ9Y5L2 63 aa17.33■□□□□ 0.37
CLN6-201ENST00000249806 WNK2Q9Y3S1 2297 aa17.33■□□□□ 0.36
CLN6-201ENST00000249806 TIMM23O14925 209 aa17.33■□□□□ 0.36
CLN6-201ENST00000249806 KLRD1Q13241 179 aa17.33■□□□□ 0.36
CLN6-201ENST00000249806 TEX38Q6PEX7 206 aa17.33■□□□□ 0.36
CLN6-201ENST00000249806 SSBP3Q9BWW4 388 aaPredicted RBP17.33■□□□□ 0.36
CLN6-201ENST00000249806 MRPL32Q9BYC8 188 aaKnown RBP17.33■□□□□ 0.36
CLN6-201ENST00000249806 PRORYQ9H606 182 aa17.33■□□□□ 0.36
CLN6-201ENST00000249806 AKAP6Q13023 2319 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 PPP1R2P9O14990 202 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 MOSP00540 346 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 C10orf113Q5VZT2 155 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 OR5AU1Q8NGC0 362 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 SGMS2Q8NHU3 365 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 ZNF355PQ9NSJ1 428 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 ARL2-SNX15V9GYD0 113 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 TEX22C9J3V5 150 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 NDUFS7O75251 213 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 CRYGCP07315 174 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 PYYP10082 97 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 CDKN1AP38936 164 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 PVRIGQ6DKI7 326 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 CHODLQ9H9P2 273 aa17.32■□□□□ 0.36
CLN6-201ENST00000249806 LOC105371242A0A075B767 164 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 A0A0U1RQK1 487 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 A0A1W2PRD5 423 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 A0A1W2PRF3 423 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 A0A1W2PRM7 423 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 HELTA6NFD8 242 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 CD24P25063 80 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 HTR1DP28221 377 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 TPTE2P1Q5T6R2 138 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 LHFPL4Q7Z7J7 247 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 HIST3H2BBQ8N257 126 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 EAF1Q96JC9 268 aaPredicted RBP17.31■□□□□ 0.36
CLN6-201ENST00000249806 NIT2Q9NQR4 276 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 GAR1Q9NY12 217 aaKnown RBP17.31■□□□□ 0.36
CLN6-201ENST00000249806 DMRT1Q9Y5R6 373 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 SNRPCP09234 159 aaKnown RBP17.31■□□□□ 0.36
CLN6-201ENST00000249806 PLGLAQ15195 96 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 MRPL41Q8IXM3 137 aaKnown RBP17.31■□□□□ 0.36
CLN6-201ENST00000249806 OR10G8Q8NGN5 311 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 TNFRSF19Q9NS68 423 aa17.31■□□□□ 0.36
CLN6-201ENST00000249806 C9JCJ5 164 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 UBE2L3P68036 154 aaKnown RBP17.3■□□□□ 0.36
CLN6-201ENST00000249806 OR5I1Q13606 314 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 DTX2Q86UW9 622 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 OR11H6Q8NGC7 330 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 OR1P1Q8NH06 330 aa17.3■□□□□ 0.36
CLN6-201ENST00000249806 SRSF12Q8WXF0 261 aaKnown RBP17.3■□□□□ 0.36
CLN6-201ENST00000249806 PFDN5Q99471 154 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms