RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
DDX49-201ENST00000247003 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
DDX49-201ENST00000247003 FAM3BP58499 235 aaPredicted RBP12.14□□□□□ -0.47
DDX49-201ENST00000247003 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 HCP5Q6MZN7 132 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 PYGO2Q9BRQ0 406 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 SLC25A33Q9BSK2 321 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
DDX49-201ENST00000247003 C9JCJ5 164 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 UBE2L3P68036 154 aaKnown RBP12.14□□□□□ -0.47
DDX49-201ENST00000247003 C4orf17Q53FE4 359 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 OR1P1Q8NH06 330 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 OR4X1Q8NH49 305 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
DDX49-201ENST00000247003 KALRNO60229 2985 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 ACACBO00763 2458 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
DDX49-201ENST00000247003 LY6LH3BQJ8 138 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 TIMM23O14925 209 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 MMDQ15546 238 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 OR5AU1Q8NGC0 362 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
DDX49-201ENST00000247003 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
DDX49-201ENST00000247003 A0A1W2PRE2 83 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 PGPEP1LA6NFU8 196 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 GGCTO75223 188 aaKnown RBP12.12□□□□□ -0.47
DDX49-201ENST00000247003 OR10J4P0C629 311 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 HOXA5P20719 270 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 S100A2P29034 98 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
DDX49-201ENST00000247003 LCN2P80188 198 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
DDX49-201ENST00000247003 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
DDX49-201ENST00000247003 FRZBQ92765 325 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 SRSF8Q9BRL6 282 aaKnown RBP12.12□□□□□ -0.47
DDX49-201ENST00000247003 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
DDX49-201ENST00000247003 F11RQ9Y624 299 aaKnown RBP12.12□□□□□ -0.47
DDX49-201ENST00000247003 TRBV20OR9-2A0A075B6H5 130 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 PSMB11A5LHX3 300 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 PCP4L1A6NKN8 68 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 CNIH1O95406 144 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 APELAP0DMC3 54 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 HNF1AP20823 631 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 PRTN3P24158 256 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 GNG4P50150 75 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 ZNF90Q03938 601 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 IGKV1D-37A0A075B6S9 117 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 CDKN1AP38936 164 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 CCDC144NLQ6NUI1 221 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 KIR3DL3Q8N743 410 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 OR10G8Q8NGN5 311 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 ZNF503Q96F45 646 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 PERPQ96FX8 193 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 TRGV9Q99603 122 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 PAXXQ9BUH6 204 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 HILPDAQ9Y5L2 63 aa12.11□□□□□ -0.47
DDX49-201ENST00000247003 MALRD1Q5VYJ5 2156 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 HELTA6NFD8 242 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 NBR2O15453 112 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 MOSP00540 346 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 CRYGCP07315 174 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 CRYBB3P26998 211 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 PAX2Q02962 417 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 SSX2Q16385 188 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 CLEC12BQ2HXU8 276 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 STXBP6Q8NFX7 210 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 OCC1Q8TAD7 63 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 PKD1L2Q7Z442 2459 aa12.1□□□□□ -0.47
DDX49-201ENST00000247003 ODF3BA8MYP8 253 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 TYMSP04818 313 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 FOXL1Q12952 345 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 KLRD1Q13241 179 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 HES1Q14469 280 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 TMEM116Q8NCL8 245 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 ITLN2Q8WWU7 325 aaPredicted RBP12.09□□□□□ -0.47
DDX49-201ENST00000247003 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
DDX49-201ENST00000247003 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 GAR1Q9NY12 217 aaKnown RBP12.09□□□□□ -0.47
DDX49-201ENST00000247003 GGTLC3B5MD39 225 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 SUMO1P63165 101 aaKnown RBP12.09□□□□□ -0.47
DDX49-201ENST00000247003 TIGITQ495A1 244 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 CENPWQ5EE01 88 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
DDX49-201ENST00000247003 FAM167A-AS1Q96KT0 104 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms