RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 A0A1W2PRS3 328 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 ZNF815PA8K554 130 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 KIR3DP1A8MWS1 328 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 CSRP3P50461 194 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 SRSF1Q07955 248 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■■■■□ 20
SSR1-201ENST00000244763 ZDBF2Q9HCK1 2354 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 AKAP6Q13023 2319 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 BEND2Q8NDZ0 799 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 TOMM7Q9P0U1 55 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 A0A1W2PRE2 83 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 F12P00748 615 aaPredicted RBP6.13□□□□□ -1.43
SSR1-201ENST00000244763 CCL20P78556 96 aa6.13□□□□□ -1.43
SSR1-201ENST00000244763 ZNHIT1O43257 154 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 C1QL2Q7Z5L3 287 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 RNF182Q8N6D2 247 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 LINC01356Q8N9X3 169 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 RCC1LQ96I51 464 aaKnown RBP6.12□□□□□ -1.43
SSR1-201ENST00000244763 A0A0G2JMZ2 1700 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 LRRC37A2A6NM11 1700 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 SAA2-SAA4A0A096LPE2 208 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 IGHV3-49A0A0A0MS15 119 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 SAA2P0DJI9 122 aaPredicted RBP6.12□□□□□ -1.43
SSR1-201ENST00000244763 TEX38Q6PEX7 206 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 SIGLEC15Q6ZMC9 328 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 ADARB2-AS1A8MUL3 147 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 CCL3L1P16619 93 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 NAT1P18440 290 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 ZNF415Q09FC8 603 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 IZUMO1RA6ND01 250 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 EMP1P54849 157 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 HEPN1Q6WQI6 88 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 TRAV41A0A0B4J266 112 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 A0A1B0GTI1 187 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 SRRM5B3KS81 715 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 IGHV1-46P01743 117 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 C17orf82Q86X59 251 aaPredicted RBP6.12□□□□□ -1.43
SSR1-201ENST00000244763 FAM201AQ5SY85 155 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 CD33P20138 364 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 H2BFSP57053 126 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 ZNF585BQ52M93 769 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 DMRTA2Q96SC8 542 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 MGAMO43451 1857 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 GBF1Q92538 1859 aa6.12□□□□□ -1.43
SSR1-201ENST00000244763 IGKV1D-43A0A0B4J1Z2 117 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 MBD3L4A6NDZ8 208 aaPredicted RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 MBD3L3A6NE82 208 aaPredicted RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 MBD3L5A6NJ08 208 aaPredicted RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 TMEM50AO95807 157 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 APOHP02749 345 aaPredicted RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 SEC11AP67812 179 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 MBD3L2Q8NHZ7 208 aaPredicted RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 CYSLTR1Q9Y271 337 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 TMEM178BH3BS89 294 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 AMBPP02760 352 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 NHLRC3Q5JS37 347 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 LINC00477Q96M19 166 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 IGHV3OR16-13A0A075B7E8 117 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 A0A087WWC5 75 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 IGHV3-74A0A0B4J1X5 117 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 IGHV3-11P01762 117 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 CELA3BP08861 270 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 OR5AN1Q8NGI8 311 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 NYNRINQ9P2P1 1898 aaKnown RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 FAM71F2Q6NXP2 309 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 PEF1Q9UBV8 284 aaKnown RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 Q6ZS92 163 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 SPTBN1Q01082 2364 aaKnown RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 A0A087WX48 190 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 FAM223BA6NKX1 122 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 KLK2P20151 261 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 FAM223AQ8IWN6 122 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 EPDR1Q9UM22 224 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 DUTP33316 252 aaKnown RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 C3orf36Q3SXR2 165 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 PUSL1Q8N0Z8 303 aaKnown RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 PHLDA1Q8WV24 401 aaPredicted RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 NRN1Q9NPD7 142 aa6.11□□□□□ -1.43
SSR1-201ENST00000244763 RPUSD1Q9UJJ7 312 aaKnown RBP6.11□□□□□ -1.43
SSR1-201ENST00000244763 IGHV2-26A0A0B4J1V2 119 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 TGFBR3LH3BV60 316 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 TIMM23O14925 209 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 ZNF250P15622 560 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 MRPL16Q9NX20 251 aaKnown RBP6.1□□□□□ -1.43
SSR1-201ENST00000244763 H3BTX0 84 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 TPTE2P1Q5T6R2 138 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
SSR1-201ENST00000244763 TRAV8-6A0A0B4J262 113 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 PLNP26678 52 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 TMEM155Q4W5P6 130 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 OSTCQ9NRP0 149 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 SLC25A15Q9Y619 301 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 LRRK1Q38SD2 2015 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 HIGD1CA8MV81 97 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 SAP30O75446 220 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 NSUN5P1Q3KNT7 163 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 MORN3Q6PF18 240 aaPredicted RBP6.1□□□□□ -1.43
SSR1-201ENST00000244763 SRD5A1P18405 259 aa6.1□□□□□ -1.43
SSR1-201ENST00000244763 PSG8Q9UQ74 426 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms