RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TMEM167BQ9NRX6 74 aa9.15□□□□□ -0.95
COPA-201ENST00000241704 PGPEP1LA6NFU8 196 aa9.15□□□□□ -0.95
COPA-201ENST00000241704 KIR2DL2P43627 348 aaPredicted RBP9.15□□□□□ -0.95
COPA-201ENST00000241704 SIGMAR1Q99720 223 aa9.15□□□□□ -0.95
COPA-201ENST00000241704 IL36RNQ9UBH0 155 aa9.15□□□□□ -0.95
COPA-201ENST00000241704 CHD3Q12873 2000 aaKnown RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 J3KRW8 73 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 LEPROTL1O95214 131 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 CD1BP29016 333 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 COMPP49747 757 aaPredicted RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 YPEL3P61236 119 aaPredicted RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 FOXL2NBQ6ZUU3 175 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 Q6ZVH6 145 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 SSC4DQ8WTU2 575 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 JMJD8Q96S16 334 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 IGHG3P01860 377 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 THBDP07204 575 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 OTX1P32242 354 aaPredicted RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 ID1P41134 155 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 NMSQ5H8A3 153 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 NPVFQ9HCQ7 196 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 TCF15Q12870 199 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 FAM106AQ4KMX7 169 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 IBA57Q5T440 356 aaKnown RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 OR4C13Q8NGP0 309 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 C1orf147Q96MC9 270 aaPredicted RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 NPCDR1Q9BY65 106 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 DENND4CQ5VZ89 1909 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 COL4A4P53420 1690 aaPredicted RBP9.14□□□□□ -0.95
COPA-201ENST00000241704 CSPG4Q6UVK1 2322 aa9.14□□□□□ -0.95
COPA-201ENST00000241704 CORTO00230 105 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 ARL14EPLP0DKL9 152 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 RPL15P61313 204 aaKnown RBP9.13□□□□□ -0.95
COPA-201ENST00000241704 METRNQ9UJH8 293 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 FBLL1A6NHQ2 334 aaKnown RBP9.13□□□□□ -0.95
COPA-201ENST00000241704 LYNX1G3V0Z9 82 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 RBFOX2O43251 390 aaKnown RBP eCLIP9.13□□□□□ -0.958e-6■■■■□ 20.3
COPA-201ENST00000241704 MPDU1O75352 247 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 LYNX1P0DP58 116 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 ESDP10768 282 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 CA7P43166 264 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 OR4P4Q8NGL7 312 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 KIAA1671Q9BY89 1806 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 IGHV1-18A0A0C4DH31 117 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 C7orf71A4D174 169 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 J3QKU1 62 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 TOMM40O96008 361 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 FXYD3Q14802 87 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 SPSB4Q96A44 273 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 PROK2Q9HC23 129 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 C2orf16Q68DN1 1984 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 PLXNB3Q9ULL4 1909 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 IGHV2-26A0A0B4J1V2 119 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 SCO2A0A1W2PP80 73 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 A0A1W2PS18 150 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 NUPR1O60356 82 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
COPA-201ENST00000241704 TMEM140Q9NV12 185 aa9.13□□□□□ -0.95
COPA-201ENST00000241704 IGKV1-12A0A0C4DH73 117 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 IGKV1D-12P01611 117 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
COPA-201ENST00000241704 NUP37Q8NFH4 326 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 ZNF524Q96C55 264 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 JKAMPQ9P055 326 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 HLA-DRB1P01911 266 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 PSG5Q15238 335 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 C20orf204Q6ZNR8 217 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 RAB37Q96AX2 223 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 C10orf113Q5VZT2 155 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 LCN12Q6JVE5 192 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 OR13A1Q8NGR1 328 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 PHF3Q92576 2039 aaKnown RBP9.12□□□□□ -0.95
COPA-201ENST00000241704 OR2T8A6NH00 312 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 TM4SF5O14894 197 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 WISP1O95388 367 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 GPR183P32249 361 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 HIST1H1AQ02539 215 aaPredicted RBP9.12□□□□□ -0.95
COPA-201ENST00000241704 STXBP6Q8NFX7 210 aa9.12□□□□□ -0.95
COPA-201ENST00000241704 CD5LO43866 347 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 OR5AL1P0C617 328 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 PRSS8Q16651 343 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 WDR82Q6UXN9 313 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 LYPD6Q86Y78 171 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 PLPPR1Q8TBJ4 325 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 A0A0G2JNJ9 132 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 C5orf63A6NC05 138 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 TMEM50AO95807 157 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 TFF3Q07654 80 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 Q9UFV3 132 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 RNFT1Q5M7Z0 435 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 EBLN2Q6P2I7 272 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 EAF1Q96JC9 268 aaPredicted RBP9.11□□□□□ -0.95
COPA-201ENST00000241704 METTL26Q96S19 204 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
COPA-201ENST00000241704 KIF26AQ9ULI4 1882 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms