RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 NKX6-3A6NJ46 265 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 H0YJW9 148 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 PYYP10082 97 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 KLF3P57682 345 aaPredicted RBP12.6□□□□□ -0.39
DDX55-201ENST00000238146 OR2T6Q8NHC8 308 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 RAB9BQ9NP90 201 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 CADP27708 2225 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 IGHG3P01860 377 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 UBE2V1Q13404 147 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 LEMD1Q68G75 181 aa12.6□□□□□ -0.39
DDX55-201ENST00000238146 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 DSCAML1Q8TD84 2053 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 OR2J3O76001 311 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
DDX55-201ENST00000238146 UBE2G1P62253 170 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 RNASEKQ6P5S7 137 aaKnown RBP12.59□□□□□ -0.39
DDX55-201ENST00000238146 ZNF329Q86UD4 541 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 ZNRD1Q9P1U0 126 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 VWC2LB2RUY7 222 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 CAMPP49913 170 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 SSBP2P81877 361 aaPredicted RBP12.59□□□□□ -0.39
DDX55-201ENST00000238146 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 SPATA12Q7Z6I5 190 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 C1orf210Q8IVY1 113 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 KIR3DL3Q8N743 410 aa12.59□□□□□ -0.39
DDX55-201ENST00000238146 CACNA1GO43497 2377 aa12.58□□□□□ -0.39
DDX55-201ENST00000238146 A0A1W2PN81 502 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 HIGD1CA8MV81 97 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 PEX7O00628 323 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 ZNF883P0CG24 379 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 RBX1P62877 108 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 ITLN1Q8WWA0 313 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 ZNF714Q96N38 554 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 IGLC7A0M8Q6 106 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 CORTO00230 105 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 SPRY3O43610 288 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 CACNG8Q8WXS5 425 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 URB1-AS1Q96HZ7 61 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 PAXXQ9BUH6 204 aa12.58□□□□□ -0.4
DDX55-201ENST00000238146 ALKBH2Q6NS38 261 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 MUC15Q8N387 334 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 C7orf69Q9H7B7 122 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 ZNF71Q9NQZ8 489 aaPredicted RBP12.57□□□□□ -0.4
DDX55-201ENST00000238146 PLSCR4Q9NRQ2 329 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 INTS1Q8N201 2190 aaKnown RBP12.57□□□□□ -0.4
DDX55-201ENST00000238146 IGHV1-69-2A0A0G2JMI3 117 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 PRR31Q5SQ13 230 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 PATE2Q6UY27 113 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 ZNF841Q6ZN19 808 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
DDX55-201ENST00000238146 RND1Q92730 232 aa12.57□□□□□ -0.4
DDX55-201ENST00000238146 DLL1O00548 723 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 COX7A2P2O60397 106 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 NDUFA4L2Q9NRX3 87 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 E7EUB6 86 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 C10orf113Q5VZT2 155 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 FAM222BQ8WU58 562 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 ARRDC1-AS1Q9H2J1 176 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 SLC25A15Q9Y619 301 aa12.56□□□□□ -0.4
DDX55-201ENST00000238146 LOC105371242A0A075B767 164 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 HIST1H1EP10412 219 aaKnown RBP12.55□□□□□ -0.4
DDX55-201ENST00000238146 GNG5P63218 68 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 BHLHA15Q7RTS1 189 aaPredicted RBP12.55□□□□□ -0.4
DDX55-201ENST00000238146 DEFB108BQ8NET1 73 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 ZNF596Q8TC21 504 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 FXYD5Q96DB9 178 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 CHRDL1Q9BU40 450 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 TMEM265A0A087WTH1 108 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 SH2D7A6NKC9 451 aaPredicted RBP12.55□□□□□ -0.4
DDX55-201ENST00000238146 PRR33A8MZF0 331 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 FSTL3O95633 263 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 ATP5L2Q7Z4Y8 100 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 TMEM70Q9BUB7 260 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
DDX55-201ENST00000238146 LINC00574Q9H8X3 128 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 RPUSD1Q9UJJ7 312 aaKnown RBP12.55□□□□□ -0.4
DDX55-201ENST00000238146 TANC2Q9HCD6 1990 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 ICE1Q9Y2F5 2266 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 K7EP13 123 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 ERHP84090 104 aaKnown RBP12.55□□□□□ -0.4
DDX55-201ENST00000238146 FAM120AOSQ5T036 256 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 VHLLQ6RSH7 139 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 SGK494Q96LW2 274 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 GAFA1Q96PS6 74 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 TP73-AS1Q9UF72 201 aa12.55□□□□□ -0.4
DDX55-201ENST00000238146 IGHV3-48P01763 117 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 TNFSF4P23510 183 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 MYCNOSP40205 109 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 OR2D3Q8NGH3 330 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 NPIPB3Q92617 1050 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 CCL13Q99616 98 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 GAL3ST2Q9H3Q3 398 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 TECTAO75443 2155 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 IGHV2-70DA0A0C4DH43 119 aa12.54□□□□□ -0.4
DDX55-201ENST00000238146 FBLN7Q53RD9 439 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms