RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 WIPF2Q8TF74 440 aaPredicted RBP10.71□□□□□ -0.69
VAMP4-201ENST00000236192 C1orf147Q96MC9 270 aaPredicted RBP10.71□□□□□ -0.69
VAMP4-201ENST00000236192 DOCK4Q8N1I0 1966 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 hCG_38984A0A1B0GV85 526 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 LILRA5A6NI73 299 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 TNFRSF6BO95407 300 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 ARTNQ5T4W7 220 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 FOXI2Q6ZQN5 318 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 Q6ZS49 121 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 TMEM54Q969K7 222 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 UCN2Q96RP3 112 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 SCNM1Q9BWG6 230 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 ZNF785A8K8V0 405 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 IGHV4-39P01824 125 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 VWC2Q2TAL6 325 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 ANXA2RQ3ZCQ2 193 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 Q6ZRM9 215 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 RASL11BQ9BPW5 248 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 CFHR5Q9BXR6 569 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 CXXC4Q9H2H0 198 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 FBXL15Q9H469 300 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 IDI2-AS1Q9NZ38 188 aa10.71□□□□□ -0.7
VAMP4-201ENST00000236192 K7ERJ3 54 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 K7ESF4 209 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 TAL2Q16559 108 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
VAMP4-201ENST00000236192 C2CD4DB7Z1M9 353 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 LINC00271P0C7V0 271 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 GNG5P63218 68 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 WFDC2Q14508 124 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 VKORC1L1Q8N0U8 176 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 TMEM101Q96IK0 257 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 PRDM14Q9GZV8 571 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 EDA2RQ9HAV5 297 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 PSG8Q9UQ74 426 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 MCM3APO60318 1980 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 ADIPOQQ15848 244 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 PRR31Q5SQ13 230 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 LSM4Q9Y4Z0 139 aaKnown RBP10.7□□□□□ -0.7
VAMP4-201ENST00000236192 TIMD4Q96H15 378 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 ZNF714Q96N38 554 aa10.7□□□□□ -0.7
VAMP4-201ENST00000236192 PRR33A8MZF0 331 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 ATP5G2Q06055 141 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 PRRC2BQ5JSZ5 2229 aaKnown RBP10.69□□□□□ -0.7
VAMP4-201ENST00000236192 FAM90A9PA6NNJ1 464 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 K7EN84 100 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 SPANXN1Q5VSR9 72 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
VAMP4-201ENST00000236192 COL11A2P13942 1736 aaPredicted RBP10.69□□□□□ -0.7
VAMP4-201ENST00000236192 SHANK3Q9BYB0 1731 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 AMTNQ6UX39 209 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 IFI27L2Q9H2X8 130 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 LRRC29Q8WV35 223 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 C11orf52Q96A22 123 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 FZR1Q9UM11 496 aa10.69□□□□□ -0.7
VAMP4-201ENST00000236192 PRSS29PA6NIE9 313 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 ZNF815PA8K554 130 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 WNT2P09544 360 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 CIARTQ8N365 385 aaPredicted RBP10.68□□□□□ -0.7
VAMP4-201ENST00000236192 NGBQ9NPG2 151 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 IGHV5-51A0A0C4DH38 117 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 DEFB103AP81534 67 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 ASIPP42127 132 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 FOXI1Q12951 378 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 ATXN8Q156A1 80 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 CNEP1R1Q8N9A8 125 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 MRPS17Q9Y2R5 130 aaKnown RBP10.68□□□□□ -0.7
VAMP4-201ENST00000236192 IGKV1-12A0A0C4DH73 117 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 IGKV1D-12P01611 117 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 ZNF56Q15929 161 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 ABHD17AQ96GS6 310 aa10.68□□□□□ -0.7
VAMP4-201ENST00000236192 RSPO4Q2I0M5 234 aaPredicted RBP10.67□□□□□ -0.7
VAMP4-201ENST00000236192 KIF26BQ2KJY2 2108 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 LTBP4Q8N2S1 1624 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 MRPS21P82921 87 aaKnown RBP10.67□□□□□ -0.7
VAMP4-201ENST00000236192 FAM231DQ6ZW35 169 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 PDE4DIPQ5VU43 2346 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
VAMP4-201ENST00000236192 D6R8Y8 96 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 SYNGR3O43761 229 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 PTPRDP23468 1912 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 J3KT08 172 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 ZC2HC1BQ5TFG8 222 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
VAMP4-201ENST00000236192 SPAG8Q99932 426 aaPredicted RBP10.67□□□□□ -0.7
VAMP4-201ENST00000236192 IGLL5B9A064 214 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 H3BTX0 84 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 PPIFP30405 207 aaKnown RBP10.66□□□□□ -0.7
VAMP4-201ENST00000236192 VEGFBP49765 207 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 C1orf122Q6ZSJ8 110 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 SPATA12Q7Z6I5 190 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 PLNP26678 52 aa10.66□□□□□ -0.7
VAMP4-201ENST00000236192 VKORC1Q9BQB6 163 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms