RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CCDC140Q96MF4 163 aa21.09■□□□□ 0.97
CHMP4B-201ENST00000217402 PRSS46E5RG02 174 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 LGALS1P09382 135 aaKnown RBP21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 ARL16Q0P5N6 197 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 ACSM6Q6P461 480 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 NDUFA11Q86Y39 141 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 STX12Q86Y82 276 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 ZNF502Q8TBZ5 544 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 C4orf3Q8WVX3 66 aa21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 MRPL36Q9P0J6 103 aaKnown RBP21.08■□□□□ 0.97
CHMP4B-201ENST00000217402 ADARB2-AS1A8MUL3 147 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 SULT1A1P50225 295 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 EWSR1Q01844 656 aaKnown RBP eCLIP21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 DEFB136Q30KP8 78 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 ZNF343Q6P1L6 599 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 CLEC19AQ6UXS0 136 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 C8orf86Q6ZUL3 223 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 OR10P1Q8NGE3 313 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 SLC25A31Q9H0C2 315 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 STAB1Q9NY15 2570 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 TRBV7-1A0A0A6YYK4 115 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 SLC25A4P12235 298 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 CD300CQ08708 224 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 Q56UQ5 140 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 ETFRF1Q6IPR1 90 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 ACOT7LQ6ZUV0 252 aa21.07■□□□□ 0.96
CHMP4B-201ENST00000217402 TRBV12-3P01733 135 aa21.06■□□□□ 0.96
CHMP4B-201ENST00000217402 RPL12P30050 165 aaKnown RBP21.06■□□□□ 0.96
CHMP4B-201ENST00000217402 GPR183P32249 361 aa21.06■□□□□ 0.96
CHMP4B-201ENST00000217402 TCTE3Q8IZS6 198 aa21.06■□□□□ 0.96
CHMP4B-201ENST00000217402 ACY3Q96HD9 319 aa21.06■□□□□ 0.96
CHMP4B-201ENST00000217402 ZC4H2Q9NQZ6 224 aa21.06■□□□□ 0.96
CHMP4B-201ENST00000217402 I3L521 148 aa21.05■□□□□ 0.96
CHMP4B-201ENST00000217402 MFAP4P55083 255 aa21.05■□□□□ 0.96
CHMP4B-201ENST00000217402 NHLH2Q02577 135 aa21.05■□□□□ 0.96
CHMP4B-201ENST00000217402 SLC35E1Q96K37 410 aa21.05■□□□□ 0.96
CHMP4B-201ENST00000217402 OR2T8A6NH00 312 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 F8W735 103 aaPredicted RBP21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 GPX4P36969 197 aaPredicted RBP21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 RND2P52198 227 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 SLC38A11Q08AI6 406 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 SHISA2Q6UWI4 295 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 DUX3Q96PT4 197 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 PPP5D1E7EU14 171 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 CLEC3BP05452 202 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 ZNF546Q86UE3 836 aa21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 BSCL2Q96G97 398 aaPredicted RBP21.04■□□□□ 0.96
CHMP4B-201ENST00000217402 SMCO3A2RU48 225 aa21.03■□□□□ 0.96
CHMP4B-201ENST00000217402 GAMTQ14353 236 aa21.03■□□□□ 0.96
CHMP4B-201ENST00000217402 CACNG8Q8WXS5 425 aa21.03■□□□□ 0.96
CHMP4B-201ENST00000217402 PEF1Q9UBV8 284 aaKnown RBP21.03■□□□□ 0.96
CHMP4B-201ENST00000217402 NUP62P37198 522 aaPredicted RBP21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 NPBWR1P48145 328 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 HBG1P69891 147 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 HBG2P69892 147 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 LILRB2Q8N423 598 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 OR11H4Q8NGC9 324 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 OR4X1Q8NH49 305 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 NPIPB3Q92617 1050 aa21.02■□□□□ 0.96
CHMP4B-201ENST00000217402 IGHV4OR15-8A0A075B7B6 117 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 A0A087WW49 117 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 GNG7O60262 68 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 DLK1P80370 383 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 RUNX1Q01196 453 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 BAXQ07812 192 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 INO80EQ8NBZ0 244 aaPredicted RBP21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 NEURL2Q9BR09 285 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 TNFSF18Q9UNG2 199 aa21.01■□□□□ 0.95
CHMP4B-201ENST00000217402 ARPC5O15511 151 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 SCAF4O95104 1147 aaKnown RBP21■□□□□ 0.95
CHMP4B-201ENST00000217402 ARL3P36405 182 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 AKR1C1Q04828 323 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 KRTAP21-3Q3LHN1 58 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 TMEM116Q8NCL8 245 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 OR11H1Q8NG94 326 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 OR5C1Q8NGR4 320 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 RAX2Q96IS3 184 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 TXN2Q99757 166 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 HSPB11Q9Y547 144 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 CLN5O75503 358 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 S100A11P31949 105 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 FCGR2BP31994 310 aaPredicted RBP21■□□□□ 0.95
CHMP4B-201ENST00000217402 AP2S1P53680 142 aaPredicted RBP21■□□□□ 0.95
CHMP4B-201ENST00000217402 OR1S2Q8NGQ3 325 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 AQP10Q96PS8 301 aa21■□□□□ 0.95
CHMP4B-201ENST00000217402 BMPR1BO00238 502 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 TGOLN2O43493 480 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 CLINT1Q14677 625 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 FAM209BQ5JX69 171 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 OR1N2Q8NGR9 330 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 CHRDL1Q9BU40 450 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 SMIM3Q9BZL3 60 aa20.99■□□□□ 0.95
CHMP4B-201ENST00000217402 RNF222A6NCQ9 220 aa20.98■□□□□ 0.95
CHMP4B-201ENST00000217402 HSPB1P04792 205 aaKnown RBP20.98■□□□□ 0.95
CHMP4B-201ENST00000217402 DPF1Q92782 380 aa20.98■□□□□ 0.95
CHMP4B-201ENST00000217402 GAR1Q9NY12 217 aaKnown RBP20.98■□□□□ 0.95
CHMP4B-201ENST00000217402 CCL24O00175 119 aa20.97■□□□□ 0.95
CHMP4B-201ENST00000217402 ATP6V0BQ99437 205 aa20.97■□□□□ 0.95
CHMP4B-201ENST00000217402 GGACTQ9BVM4 153 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms