RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 GBGT1Q8N5D6 347 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 CCDC71LQ8N9Z2 235 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 PDCD10Q9BUL8 212 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 MFFQ9GZY8 342 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 TMEM231Q9H6L2 316 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 COPZ2Q9P299 210 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 EXTL2Q9UBQ6 330 aa11.61□□□□□ -0.55
ERCC1-201ENST00000013807 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 NPPCP23582 126 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 TAS2R19P59542 299 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 Q6ZRM9 215 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 OR4D10Q8NGI6 311 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 OR13C8Q8NGS7 320 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 GRAMD2BQ96HH9 432 aa11.6□□□□□ -0.55
ERCC1-201ENST00000013807 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
ERCC1-201ENST00000013807 TRAV30A0A087WSZ9 112 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 GABARAPH6UMI1 98 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 K7EQG2 157 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 DNASE2O00115 360 aaPredicted RBP11.59□□□□□ -0.55
ERCC1-201ENST00000013807 IGKV1-17P01599 117 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 TCTAP57738 103 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 DEFB131AP59861 70 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 SPCS3P61009 180 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
ERCC1-201ENST00000013807 SP6Q3SY56 376 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 TMEM41BQ5BJD5 291 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 C11orf45Q8TAV5 145 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 GLYATL2Q8WU03 294 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 RRNAD1Q96FB5 475 aaKnown RBP11.59□□□□□ -0.55
ERCC1-201ENST00000013807 NAA50Q9GZZ1 169 aaKnown RBP11.59□□□□□ -0.55
ERCC1-201ENST00000013807 TMEM222Q9H0R3 208 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.59□□□□□ -0.55
ERCC1-201ENST00000013807 U3KQE9 123 aa11.59□□□□□ -0.55
ERCC1-201ENST00000013807 RAB3DO95716 219 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
ERCC1-201ENST00000013807 HTR2BP41595 481 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 MRPS10P82664 201 aaKnown RBP11.58□□□□□ -0.56
ERCC1-201ENST00000013807 TMEM187Q14656 261 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 MLANAQ16655 118 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 TRIM16LQ309B1 348 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 GPR107Q5VW38 600 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 STEAP1BQ6NZ63 245 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 MARCH1Q8TCQ1 289 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 DCANP1Q8TF63 244 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 METTL26Q96S19 204 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 RTBDNQ9BSG5 229 aaPredicted RBP11.58□□□□□ -0.56
ERCC1-201ENST00000013807 MIXL1Q9H2W2 232 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 HRH4Q9H3N8 390 aa11.58□□□□□ -0.56
ERCC1-201ENST00000013807 TEX13DA0A0J9YY54 714 aaPredicted RBP11.57□□□□□ -0.56
ERCC1-201ENST00000013807 SCGB2A1O75556 95 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 CA1P00915 261 aaPredicted RBP11.57□□□□□ -0.56
ERCC1-201ENST00000013807 SMIM18P0DKX4 95 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 OPRK1P41145 380 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 HOXA1P49639 335 aaPredicted RBP11.57□□□□□ -0.56
ERCC1-201ENST00000013807 PPP5CP53041 499 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 MEF2DQ14814 521 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 C2orf83Q53S99 150 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 TRPT1Q86TN4 253 aaKnown RBP11.57□□□□□ -0.56
ERCC1-201ENST00000013807 ENY2Q9NPA8 101 aa11.57□□□□□ -0.56
ERCC1-201ENST00000013807 OR5AC1P0C628 307 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 P2RY1P47900 373 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 NANOS2P60321 138 aaKnown RBP11.56□□□□□ -0.56
ERCC1-201ENST00000013807 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
ERCC1-201ENST00000013807 RBMS2Q15434 407 aaKnown RBP11.56□□□□□ -0.56
ERCC1-201ENST00000013807 RNASE12Q5GAN4 147 aaKnown RBP11.56□□□□□ -0.56
ERCC1-201ENST00000013807 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 Q8NAQ8 132 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 LHFPL5Q8TAF8 219 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 RNASEH2CQ8TDP1 164 aaKnown RBP11.56□□□□□ -0.56
ERCC1-201ENST00000013807 RBPMSQ93062 196 aaKnown RBP11.56□□□□□ -0.56
ERCC1-201ENST00000013807 CACFD1Q9UGQ2 172 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 GPR132Q9UNW8 380 aa11.56□□□□□ -0.56
ERCC1-201ENST00000013807 IGHV3-66A0A0C4DH42 116 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 RPS10-NUDT3A0A1W2PQS6 291 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 ZNF705EA8MWA4 302 aaPredicted RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 CTDSPLO15194 276 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 IFNA4P05014 189 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 IGLC1P0CG04 106 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 SPP1P10451 314 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 SLC25A4P12235 298 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 DHODHQ02127 395 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 SCGB2B2Q4G0G5 96 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 PRSS54Q6PEW0 395 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 STHQ8IWL8 128 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 SELENOHQ8IZQ5 122 aaKnown RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 SMIM4Q8WVI0 70 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 TMEM230Q96A57 120 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 NAA60Q9H7X0 242 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
ERCC1-201ENST00000013807 RABL2BQ9UNT1 228 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
ERCC1-201ENST00000013807 AP2S1P53680 142 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms