RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C18orf32Q8TCD1 76 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 COL5A1-AS1Q5SY13 56 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 KIR3DL3Q8N743 410 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 GAFA1Q96PS6 74 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 MRPL36Q9P0J6 103 aaKnown RBP11.39□□□□□ -0.59
USH1C-201ENST00000005226 RPH3ALQ9UNE2 315 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 TANC2Q9HCD6 1990 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 IZUMO1RA6ND01 250 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 HINT1P49773 126 aaPredicted RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 TAS2R45P59539 299 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 CD69Q07108 199 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 SPACA3Q8IXA5 215 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 SLC35E1Q96K37 410 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 MRPL20Q9BYC9 149 aaKnown RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 AMMECR1Q9Y4X0 333 aaPredicted RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 SH2D7A6NKC9 451 aaPredicted RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 H3BTX0 84 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 REG1AP05451 166 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 CFHR2P36980 270 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 HNRNPA3P51991 378 aaKnown RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 ZNF474Q6S9Z5 364 aaPredicted RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 PATE2Q6UY27 113 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 RBM14Q96PK6 669 aaKnown RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 RAI1Q7Z5J4 1906 aaPredicted RBP11.38□□□□□ -0.59
USH1C-201ENST00000005226 DMXL1Q9Y485 3027 aa11.38□□□□□ -0.59
USH1C-201ENST00000005226 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 M0QZ24 198 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 HLA-DQA1P01909 254 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 CCL3L1P16619 93 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 Q56UQ5 140 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 NPIPB3Q92617 1050 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 SARAFQ96BY9 339 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
USH1C-201ENST00000005226 SP9P0CG40 484 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 APELAP0DMC3 54 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 GAGE1Q13065 139 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 ZNF841Q6ZN19 808 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 RNF7Q9UBF6 113 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 UQCR10Q9UDW1 63 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 KALRNO60229 2985 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 PSMB11A5LHX3 300 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 RPL19P84098 196 aaKnown RBP11.37□□□□□ -0.59
USH1C-201ENST00000005226 TNFAIP6P98066 277 aaPredicted RBP11.37□□□□□ -0.59
USH1C-201ENST00000005226 POU2AF1Q16633 256 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
USH1C-201ENST00000005226 C19orf35Q6ZS72 473 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
USH1C-201ENST00000005226 BLNKQ8WV28 456 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 HARBI1Q96MB7 349 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 COMMD5Q9GZQ3 224 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 LAMTOR2Q9Y2Q5 125 aa11.37□□□□□ -0.59
USH1C-201ENST00000005226 IGHV3-21A0A0B4J1V1 117 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 STUMQ69YW2 141 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 ZNF257Q9Y2Q1 563 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 COX7A2P2O60397 106 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 IGHV1-46P01743 117 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 CCL8P80075 99 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
USH1C-201ENST00000005226 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 ZNF329Q86UD4 541 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 ST6GALNAC6Q969X2 333 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
USH1C-201ENST00000005226 ZFP30Q9Y2G7 519 aa11.36□□□□□ -0.59
USH1C-201ENST00000005226 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 ITGB1BP1O14713 200 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 HSBP1O75506 76 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 MRPL52Q86TS9 123 aaKnown RBP11.35□□□□□ -0.59
USH1C-201ENST00000005226 ADGRG4Q8IZF6 3080 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 M0R2Z0 102 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 GLRXP35754 106 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 C10orf113Q5VZT2 155 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 ERASQ7Z444 233 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 MBD6Q96DN6 1003 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 ARL2-SNX15V9GYD0 113 aa11.35□□□□□ -0.59
USH1C-201ENST00000005226 DYSFO75923 2080 aa11.34□□□□□ -0.59
USH1C-201ENST00000005226 CGB1A6NKQ9 187 aa11.34□□□□□ -0.59
USH1C-201ENST00000005226 HIGD1CA8MV81 97 aa11.34□□□□□ -0.59
USH1C-201ENST00000005226 PEX7O00628 323 aa11.34□□□□□ -0.59
USH1C-201ENST00000005226 ORM2P19652 201 aa11.34□□□□□ -0.59
USH1C-201ENST00000005226 FOXA3P55318 350 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms