RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
PHGDH-218ENST00000641491 CXorf58Q96LI9 332 aa10.17□□□□□ -0.78
PHGDH-218ENST00000641491 P2RX4Q99571 388 aa10.17□□□□□ -0.78
PHGDH-218ENST00000641491 SERTAD4Q9NUC0 356 aa10.17□□□□□ -0.78
PHGDH-218ENST00000641491 MBD2Q9UBB5 411 aa10.17□□□□□ -0.78
PHGDH-218ENST00000641491 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
PHGDH-218ENST00000641491 ANK2Q01484 3957 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 E7EUB6 86 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 OR2J3O76001 311 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 IGHG4P01861 327 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 PRH1P02810 166 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 EGR2P11161 476 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-218ENST00000641491 SSBP2P81877 361 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-218ENST00000641491 SRSF4Q08170 494 aaKnown RBP10.16□□□□□ -0.78
PHGDH-218ENST00000641491 C2orf83Q53S99 150 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 Q56UQ5 140 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 C11orf87Q6NUJ2 197 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 C3orf56Q8N813 242 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 UBAC2Q8NBM4 344 aa10.16□□□□□ -0.78
PHGDH-218ENST00000641491 TAF15Q92804 592 aaKnown RBP eCLIP10.16□□□□□ -0.78
PHGDH-218ENST00000641491 RANGRFQ9HD47 186 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-218ENST00000641491 GAR1Q9NY12 217 aaKnown RBP10.16□□□□□ -0.78
PHGDH-218ENST00000641491 CGB1A6NKQ9 187 aa10.15□□□□□ -0.78
PHGDH-218ENST00000641491 RAB9AP51151 201 aa10.15□□□□□ -0.78
PHGDH-218ENST00000641491 AKR1C1Q04828 323 aa10.15□□□□□ -0.78
PHGDH-218ENST00000641491 BAXQ07812 192 aa10.15□□□□□ -0.78
PHGDH-218ENST00000641491 ASPHD1Q5U4P2 390 aa10.15□□□□□ -0.78
PHGDH-218ENST00000641491 ACSM6Q6P461 480 aa10.15□□□□□ -0.78
PHGDH-218ENST00000641491 WDR89Q96FK6 387 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-218ENST00000641491 LYRM2Q9NU23 88 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-218ENST00000641491 A0A1B0GVG6 124 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 A0A1B0GW64 132 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 METTL15P1P0C7V9 234 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 RNASE2P10153 161 aaKnown RBP10.14□□□□□ -0.79
PHGDH-218ENST00000641491 SLC25A4P12235 298 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 NPBWR1P48145 328 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 SULT1A1P50225 295 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 C15orf32Q32M92 178 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 KRTAP24-1Q3LI83 254 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 ZFP69Q49AA0 526 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 AWAT1Q58HT5 328 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 ZNF546Q86UE3 836 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 C11orf44Q8N8P7 122 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 OR1S2Q8NGQ3 325 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 GNB4Q9HAV0 340 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 OR5AC2Q9NZP5 309 aa10.14□□□□□ -0.79
PHGDH-218ENST00000641491 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-218ENST00000641491 IGLV11-55A0A075B6I3 123 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 TRBV7-1A0A0A6YYK4 115 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 FAM24AA6NFZ4 105 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 GNG7O60262 68 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 MT-CO2P00403 227 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 IGLV1-40P01703 118 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 FABP1P07148 127 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 C4BPBP20851 252 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 RPL12P30050 165 aaKnown RBP10.13□□□□□ -0.79
PHGDH-218ENST00000641491 PPIFP30405 207 aaKnown RBP10.13□□□□□ -0.79
PHGDH-218ENST00000641491 S100A11P31949 105 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 AP2S1P53680 142 aaPredicted RBP10.13□□□□□ -0.79
PHGDH-218ENST00000641491 MFAP4P55083 255 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 SLC16A13Q7RTY0 426 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 TCTE3Q8IZS6 198 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 TMEM217Q8N7C4 229 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 CHAC2Q8WUX2 184 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 C21orf62Q9NYP8 219 aa10.13□□□□□ -0.79
PHGDH-218ENST00000641491 IGHV3-21A0A0B4J1V1 117 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 A0A1W2PRX2 142 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 ARPC5O15511 151 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 DFFBO76075 338 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 CST7O76096 145 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 BRI3O95415 125 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 IFNA5P01569 189 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 RPLP1P05386 114 aaKnown RBP10.12□□□□□ -0.79
PHGDH-218ENST00000641491 PSMB8P28062 276 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 GPX4P36969 197 aaPredicted RBP10.12□□□□□ -0.79
PHGDH-218ENST00000641491 PROK1P58294 105 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 EWSR1Q01844 656 aaKnown RBP eCLIP10.12□□□□□ -0.79
PHGDH-218ENST00000641491 CFHR3Q02985 330 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 SLC38A11Q08AI6 406 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 IL15RAQ13261 267 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 RAB31Q13636 194 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 C19orf35Q6ZS72 473 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 VN1R17PQ8TDU5 208 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 DPF1Q92782 380 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 ACY3Q96HD9 319 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 OR4C12Q96R67 309 aa10.12□□□□□ -0.79
PHGDH-218ENST00000641491 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 SMLR1H3BR10 107 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 NUPL2O15504 423 aaKnown RBP10.11□□□□□ -0.79
PHGDH-218ENST00000641491 CD28P10747 220 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 NSUN5P1Q3KNT7 163 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 C19orf54Q5BKX5 351 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 ACOT7LQ6ZUV0 252 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 TMEM252Q8N6L7 170 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 CACNG8Q8WXS5 425 aa10.11□□□□□ -0.79
PHGDH-218ENST00000641491 UBE2E2Q96LR5 201 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms