RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 ZNF331Q9NQX6 463 aaPredicted RBP16.78■□□□□ 0.28
PMS1-222ENST00000639501 SPENQ96T58 3664 aaKnown RBP16.78■□□□□ 0.28
PMS1-222ENST00000639501 MED13Q9UHV7 2174 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 PLA2G2CQ5R387 149 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 RNASEKQ6P5S7 137 aaKnown RBP16.77■□□□□ 0.28
PMS1-222ENST00000639501 TNFRSF19Q9NS68 423 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 ZNF355PQ9NSJ1 428 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 OTOGLQ3ZCN5 2332 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 SH2D7A6NKC9 451 aaPredicted RBP16.77■□□□□ 0.28
PMS1-222ENST00000639501 LYZL6O75951 148 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 SSPNQ14714 243 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 OR4A47Q6IF82 309 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 LINC00696Q6ZRV3 163 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 DDB2Q92466 427 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 PLEKHA3Q9HB20 300 aa16.77■□□□□ 0.28
PMS1-222ENST00000639501 MFAP2P55001 183 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 UBE2G1P62253 170 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 ARG2P78540 354 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 DMXL1Q9Y485 3027 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 PRR33A8MZF0 331 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 J3QW42 95 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 MRPL49Q13405 166 aaKnown RBP16.76■□□□□ 0.27
PMS1-222ENST00000639501 MLANAQ16655 118 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 TMEM14BQ9NUH8 114 aa16.76■□□□□ 0.27
PMS1-222ENST00000639501 LOXL3P58215 753 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 URB1-AS1Q96HZ7 61 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 RNF24Q9Y225 148 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 ABHD17BQ5VST6 288 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 NUP35Q8NFH5 326 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 CLCF1Q9UBD9 225 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 DUSP13Q9UII6 198 aa16.75■□□□□ 0.27
PMS1-222ENST00000639501 TRAV5A0A0B4J249 113 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 HSPE1P61604 102 aaKnown RBP16.74■□□□□ 0.27
PMS1-222ENST00000639501 SMIM21Q3B7S5 101 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 PNKDQ8N490 385 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 MBD6Q96DN6 1003 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 CXXC4Q9H2H0 198 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 IDI2-AS1Q9NZ38 188 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 FOXA2Q9Y261 457 aaPredicted RBP16.74■□□□□ 0.27
PMS1-222ENST00000639501 MUC6Q6W4X9 2439 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 IGHV1-2P23083 117 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 MPV17L2Q567V2 206 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 WIPF2Q8TF74 440 aaPredicted RBP16.74■□□□□ 0.27
PMS1-222ENST00000639501 JPT1Q9UK76 154 aa16.74■□□□□ 0.27
PMS1-222ENST00000639501 VAMP3Q15836 100 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 OR9G1Q8NH87 305 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 VWC2LB2RUY7 222 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 AGFG2O95081 481 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 ZNF883P0CG24 379 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 DUSP3P51452 185 aaPredicted RBP16.73■□□□□ 0.27
PMS1-222ENST00000639501 FAM120AOSQ5T036 256 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 OR4S2Q8NH73 311 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 LRRC29Q8WV35 223 aa16.73■□□□□ 0.27
PMS1-222ENST00000639501 SNRNP40Q96DI7 357 aaKnown RBP16.73■□□□□ 0.27
PMS1-222ENST00000639501 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.72■□□□□ 0.27
PMS1-222ENST00000639501 PRDX2P32119 198 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 CA7P43166 264 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 C6orf15Q6UXA7 325 aaPredicted RBP16.72■□□□□ 0.27
PMS1-222ENST00000639501 LINC00173Q6ZV60 143 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 ENY2Q9NPA8 101 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 IGKV1D-17A0A075B6S4 117 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 C21orf140B9A014 251 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 CORTO00230 105 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 CD24P25063 80 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 CAMPP49913 170 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 KLF5Q13887 457 aaPredicted RBP16.72■□□□□ 0.27
PMS1-222ENST00000639501 OR2D3Q8NGH3 330 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 COMMD5Q9GZQ3 224 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 DEFB127Q9H1M4 99 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 SAP30LQ9HAJ7 183 aa16.72■□□□□ 0.27
PMS1-222ENST00000639501 A0A1W2PRE2 83 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 IGHV3OR15-7A0A075B7D8 119 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 CDX4O14627 284 aaPredicted RBP16.71■□□□□ 0.27
PMS1-222ENST00000639501 TIMM8AO60220 97 aaPredicted RBP16.71■□□□□ 0.27
PMS1-222ENST00000639501 MEOX1P50221 254 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 PRR27Q6MZM9 219 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 NUDT10Q8NFP7 164 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 NUDT11Q96G61 164 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
PMS1-222ENST00000639501 OR51B2Q9Y5P1 312 aa16.71■□□□□ 0.27
PMS1-222ENST00000639501 ASPMQ8IZT6 3477 aa16.71■□□□□ 0.26
PMS1-222ENST00000639501 TRAV30A0A087WSZ9 112 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 hDV102S1A0JD36 115 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 TAX1BP3O14907 124 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 SAA2P0DJI9 122 aaPredicted RBP16.7■□□□□ 0.26
PMS1-222ENST00000639501 FABP6P51161 128 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 TRAT1Q6PIZ9 186 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 FAM167A-AS1Q96KT0 104 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 SLC25A33Q9BSK2 321 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 SLC25A2Q9BXI2 301 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 SPRR3Q9UBC9 169 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 RIF1Q5UIP0 2472 aaKnown RBP16.7■□□□□ 0.26
PMS1-222ENST00000639501 ZNRF1Q8ND25 227 aa16.7■□□□□ 0.26
PMS1-222ENST00000639501 OR2T8A6NH00 312 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 OR4C46A6NHA9 309 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 PYYP10082 97 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 UBE2L3P68036 154 aaKnown RBP16.69■□□□□ 0.26
PMS1-222ENST00000639501 LRRC10Q5BKY1 277 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 LDLRAD2Q5SZI1 272 aa16.69■□□□□ 0.26
PMS1-222ENST00000639501 CORO2AQ92828 525 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms