RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 RAB13P51153 203 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 AKR1D1P51857 326 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 ZNF137PP52743 207 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 ERHP84090 104 aaKnown RBP12.31□□□□□ -0.44
SCN8A-214ENST00000637709 RNF212Q495C1 297 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 GGACTQ9BVM4 153 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 YTHDF2Q9Y5A9 579 aaKnown RBP12.31□□□□□ -0.44
SCN8A-214ENST00000637709 MPDU1O75352 247 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 RPL35P42766 123 aaKnown RBP12.31□□□□□ -0.44
SCN8A-214ENST00000637709 MFAP2P55001 183 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 PLGLAQ15195 96 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 SSX2Q16385 188 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 VMA21Q3ZAQ7 101 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 NPIPB3Q92617 1050 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
SCN8A-214ENST00000637709 FBN2P35556 2912 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 LOC105371242A0A075B767 164 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 SEC14L6B5MCN3 397 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 NDUFB4O95168 129 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 MOSP00540 346 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 IL3RAP26951 378 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 C4orf17Q53FE4 359 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 C2orf83Q53S99 150 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 SLC16A13Q7RTY0 426 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 MT-ND4LP03901 98 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 GPR6P46095 362 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-214ENST00000637709 RPS10P46783 165 aaKnown RBP12.3□□□□□ -0.44
SCN8A-214ENST00000637709 CD69Q07108 199 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 PSG5Q15238 335 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 ELOBQ15370 118 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 PCGF1Q9BSM1 259 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 CHODLQ9H9P2 273 aa12.3□□□□□ -0.44
SCN8A-214ENST00000637709 SCO2A0A1W2PP80 73 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 SNRPEP62304 92 aaKnown RBP12.29□□□□□ -0.44
SCN8A-214ENST00000637709 PRR20EP86478 221 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 PRR20CP86479 221 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 PRR20DP86480 221 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 PRR20BP86481 221 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 PRR20AP86496 221 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 HES1Q14469 280 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 BSXQ3C1V8 233 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 DYNAPQ8N1N2 210 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 C8orf31Q8N9H6 132 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 VSTM2AQ8TAG5 236 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 S4R3C0 116 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 PRB4P10163 310 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-214ENST00000637709 SFTPCP11686 197 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 MC5RP33032 325 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 TMEM37Q8WXS4 190 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 ELOVL1Q9BW60 279 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 SLC45A2Q9UMX9 530 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
SCN8A-214ENST00000637709 IGLC7A0M8Q6 106 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
SCN8A-214ENST00000637709 RAB31Q13636 194 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 MMDQ15546 238 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 PRSS8Q16651 343 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 ASPHD1Q5U4P2 390 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 TMEM144Q7Z5S9 345 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 DTX2Q86UW9 622 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 YPEL4Q96NS1 127 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 BPESC1Q9GZL8 116 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 MANBALQ9NQG1 85 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 OR7C2O60412 319 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 RND2P52198 227 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 RPL23P62829 140 aaKnown RBP12.28□□□□□ -0.44
SCN8A-214ENST00000637709 VMO1Q7Z5L0 202 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 LY6G5BQ8NDX9 201 aa12.28□□□□□ -0.44
SCN8A-214ENST00000637709 LY86O95711 162 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 GCHFRP30047 84 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 RPL29P47914 159 aaKnown RBP12.27□□□□□ -0.45
SCN8A-214ENST00000637709 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 FAM71F2Q6NXP2 309 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.45
SCN8A-214ENST00000637709 SLC25A33Q9BSK2 321 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 C1orf196B1AJZ1 125 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 HTR1DP28221 377 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
SCN8A-214ENST00000637709 RHOBP62745 196 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 C16orf82Q7Z2V1 217 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 BEND2Q8NDZ0 799 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.45
SCN8A-214ENST00000637709 NBPF19A0A087WUL8 3843 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 ABCA12Q86UK0 2595 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 TRBV20OR9-2A0A075B6H5 130 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 CXorf1O96002 111 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 CTRB1P17538 263 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 CHRNA7P36544 502 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 KLF17Q5JT82 389 aaPredicted RBP12.26□□□□□ -0.45
SCN8A-214ENST00000637709 CTRB2Q6GPI1 263 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 C8orf46Q8TAG6 207 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 ZNF503Q96F45 646 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 SLC35E1Q96K37 410 aa12.26□□□□□ -0.45
SCN8A-214ENST00000637709 USP9YO00507 2555 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms