RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	MT-ND6	P03923	174 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276		M0R2P5	195 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	HMGA2	P52926	109 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	MIR17HG	Q75NE6	70 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	OR9G1	Q8NH87	305 aa		13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1A-238	ENST00000637276	EFEMP2	O95967	443 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PPP1R32	Q7Z5V6	425 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	THAP8	Q8NA92	274 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PAPPA	Q13219	1627 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TRAV8-3	A0A0A6YYJ7	113 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	LNP1	A1A4G5	178 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DLX4	Q92988	240 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	C10orf35	Q96D05	121 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	FOXL1	Q12952	345 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TRAV14DV4	A0A0A6YYC5	116 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SCAND1	P57086	179 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SURF2	Q15527	256 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276		F5H768	121 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	ITGB1BP1	O14713	200 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	RAG2	P55895	527 aa		13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	IL6R	P08887	468 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1A-238	ENST00000637276	hADV29S1	A0JD25	119 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TCRA	P04437	139 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	ZP1	P60852	638 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276		A0A1W2PPC1	479 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	GNLY	P22749	145 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	ATP5G3	P48201	142 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	GAGE2A	Q6NT46	116 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	GCHFR	P30047	84 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	GVINP1	Q7Z2Y8	2422 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DPRX	A6NFQ7	191 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DNM1P46	Q6ZS02	220 aa		13.79	□□□□□ -0.2
CACNA1A-238	ENST00000637276		A0A0G2JMM0	328 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276		A0A1W2PPB8	328 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276		A0A1W2PRS3	328 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	KIR3DP1	A8MWS1	328 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SLC25A28	Q96A46	364 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PLAC1	Q9HBJ0	212 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TCF19	Q9Y242	345 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	UMOD	P07911	640 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TMEM86B	Q8N661	226 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PRSS22	Q9GZN4	317 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	DYSF	O75923	2080 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	SP7	Q8TDD2	431 aa	Predicted RBP	13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	C1orf159	Q96HA4	380 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	CD160	O95971	181 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	C1QTNF12	Q5T7M4	302 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PLXNB2	O15031	1838 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TRAV8-1	A0A0A6YYK1	113 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TNFRSF6B	O95407	300 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	RND3	P61587	244 aa		13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	PUSL1	Q8N0Z8	303 aa	Known RBP	13.78	□□□□□ -0.2
CACNA1A-238	ENST00000637276	TIAF1	O95411	115 aa		13.77	□□□□□ -0.2
CACNA1A-238	ENST00000637276	NBEAP1	P0C6P0	100 aa		13.77	□□□□□ -0.2
CACNA1A-238	ENST00000637276	LINC00518	Q8N0U6	118 aa		13.77	□□□□□ -0.2
CACNA1A-238	ENST00000637276	COX19	Q49B96	90 aa		13.77	□□□□□ -0.2
CACNA1A-238	ENST00000637276	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MBD3L3	A6NE82	208 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	NRXN3	Q9Y4C0	1643 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MPDZ	O75970	2070 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276		J3QW42	95 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	FCN3	O75636	299 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	NGFR	P08138	427 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RFPL3S	P0C7P2	107 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	HSPE1	P61604	102 aa	Known RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	GGTLC1	Q9BX51	225 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	NPCDR1	Q9BY65	106 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	TMEM222	Q9H0R3	208 aa		13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276	NEU4	Q8WWR8	484 aa	Predicted RBP	13.77	□□□□□ -0.21
CACNA1A-238	ENST00000637276		A0A0G2JLM5	398 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	P2RY6	Q15077	328 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MCRIP2	Q9BUT9	160 aa	Known RBP	13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276		A0A087WWL8	130 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PGPEP1L	A6NFU8	196 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	C6orf226	Q5I0X4	101 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	FAM206A	Q9NX38	181 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	EPDR1	Q9UM22	224 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	KNCN	A6PVL3	124 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	EREG	O14944	169 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	SSBP2	P81877	361 aa	Predicted RBP	13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RHOG	P84095	191 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	IGHV4-28	A0A0C4DH34	117 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RAMP1	O60894	148 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276		B9A039	149 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	PAPPA-AS1	Q5QFB9	102 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276		H3BMM0	161 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	UBE2W	Q96B02	151 aa		13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276	MBNL3	Q9NUK0	354 aa	Known RBP	13.76	□□□□□ -0.21
CACNA1A-238	ENST00000637276		A0A1W2PQF6	199 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	LY6H	O94772	140 aa		13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	RBMY1F	Q15415	496 aa	Known RBP	13.75	□□□□□ -0.21
CACNA1A-238	ENST00000637276	ZNF501	Q96CX3	271 aa	Predicted RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms