RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ST6GALNAC2Q9UJ37 374 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 FCMRO60667 390 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 NTN1O95631 604 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 B4GALT3O60512 393 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 GAGE13Q4V321 117 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 HIKESHIQ53FT3 197 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 C2orf82Q6UX34 121 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 CADM3Q8N126 398 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 OR8D4Q8NGM9 314 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 GATAD1Q8WUU5 269 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 CALYQ9NYX4 217 aa5.15□□□□□ -1.58
SCN1A-212ENST00000636194 IDI2-AS1Q9NZ38 188 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 HSPB1P04792 205 aaKnown RBP5.15□□□□□ -1.59
SCN1A-212ENST00000636194 GAS1P54826 345 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 DRAM1Q8N682 238 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 NRG4Q8WWG1 115 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 VKORC1Q9BQB6 163 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 TNFSF13O75888 250 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 FGF9P31371 208 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-212ENST00000636194 CFHR2P36980 270 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 NBL1P41271 181 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 HSPE1P61604 102 aaKnown RBP5.15□□□□□ -1.59
SCN1A-212ENST00000636194 NPC2P61916 151 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 RPL36AP83881 106 aaKnown RBP5.15□□□□□ -1.59
SCN1A-212ENST00000636194 TPTE2P1Q5T6R2 138 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 CASC2Q6XLA1 102 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 FER1L6-AS1Q8NA97 138 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 RPL36ALQ969Q0 106 aaKnown RBP5.15□□□□□ -1.59
SCN1A-212ENST00000636194 ARID2Q68CP9 1835 aa5.15□□□□□ -1.59
SCN1A-212ENST00000636194 A0A0U1RRA0 63 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 GCM2O75603 506 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-212ENST00000636194 PDCD1Q15116 288 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 ISOC2Q96AB3 205 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 COQ2Q96H96 371 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 CBLN1P23435 193 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 DDTP30046 118 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 RASL10AQ92737 203 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 CCL13Q99616 98 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 APOBEC3AP31941 199 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-212ENST00000636194 IFITM3Q01628 133 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 ST6GAL2Q96JF0 529 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 ZNF703Q9H7S9 590 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-212ENST00000636194 SLC25A37Q9NYZ2 338 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 TRAV9-1A0A075B6T8 112 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 SRD5A1P18405 259 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 GATA2P23769 480 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-212ENST00000636194 WNT2BQ93097 391 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 PLEKHB2Q96CS7 222 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 GGACTQ9BVM4 153 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 NKX2-6A6NCS4 301 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 C2CD4DB7Z1M9 353 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 SIGLEC14Q08ET2 396 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 Q6ZNX1 250 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 DKK4Q9UBT3 224 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 TRAV5A0A0B4J249 113 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 FUT5Q11128 374 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 RIMKLAQ8IXN7 391 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 PDLIM7Q9NR12 457 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 SMPXQ9UHP9 88 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A7PA6NKC0 464 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 ZNF729A6NN14 1252 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A22PA8MWA6 464 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A12PA8MX19 464 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A23PA8MXZ1 464 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 PSG1P11464 419 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 DRD3P35462 400 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 DMRTC1Q5HYR2 192 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 TEX43Q6ZNM6 134 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 PATE1Q8WXA2 126 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 SIGLEC7Q9Y286 467 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 HIVEP2P31629 2446 aa5.14□□□□□ -1.59
SCN1A-212ENST00000636194 NABP2Q9BQ15 211 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 CCL28Q9NRJ3 127 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 NDUFB1O75438 58 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 PRSS23O95084 383 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 UBE2BP63146 152 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 TNFRSF9Q07011 255 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 TAL2Q16559 108 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 C17orf47Q8NEP4 570 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 IQCF6A8MYZ5 107 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 RCC1P18754 421 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-212ENST00000636194 FGF12P61328 243 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 PIGYQ3MUY2 71 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 MIC13Q5XKP0 118 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 RASL10BQ96S79 203 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 C21orf62Q9NYP8 219 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 IGLV3-10A0A075B6K4 115 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 A0A1W2PQD3 144 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 SAP30O75446 220 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 PRB3Q04118 309 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-212ENST00000636194 LAGE3Q14657 143 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 NSUN5P1Q3KNT7 163 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 CENPWQ5EE01 88 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 SCARF2Q96GP6 870 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-212ENST00000636194 C7orf69Q9H7B7 122 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 IGHV3-64A0A075B6Q5 118 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A10PA6NDY2 464 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A20PA6NIJ5 464 aa5.13□□□□□ -1.59
SCN1A-212ENST00000636194 FAM90A8PA6NJQ4 464 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms