RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 FOXG1P55316 489 aaPredicted RBP5.36□□□□□ -1.55
PDE4D-228ENST00000636120 TMEM200BQ69YZ2 307 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 SGK494Q96LW2 274 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 GAFA1Q96PS6 74 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 ZNF106Q9H2Y7 1883 aaKnown RBP5.36□□□□□ -1.55
PDE4D-228ENST00000636120 RALGAPA1Q6GYQ0 2036 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 H7C1H1 209 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 CCL20P78556 96 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 ZNF672Q499Z4 452 aaPredicted RBP5.36□□□□□ -1.55
PDE4D-228ENST00000636120 PSMG4Q5JS54 123 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 PAPPA-AS1Q5QFB9 102 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 ERASQ7Z444 233 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 JMJD8Q96S16 334 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 NCOR1P1Q9H4R4 102 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 HEATR5BQ9P2D3 2071 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 IGHV3OR16-10A0A075B7F0 116 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 TRAV1-1A0A0B4J248 108 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 CGB1A6NKQ9 187 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 FOXI3A8MTJ6 420 aaPredicted RBP5.36□□□□□ -1.55
PDE4D-228ENST00000636120 H0YIZ8 118 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 PSMB2P49721 201 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 NUTF2P61970 127 aaKnown RBP5.36□□□□□ -1.55
PDE4D-228ENST00000636120 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
PDE4D-228ENST00000636120 NPFFR1Q9GZQ6 430 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 WDR83OSQ9Y284 106 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
PDE4D-228ENST00000636120 FNDC10F2Z333 226 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 VDAC2P45880 294 aaPredicted RBP5.35□□□□□ -1.55
PDE4D-228ENST00000636120 ZNF600Q6ZNG1 722 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 SRSF8Q9BRL6 282 aaKnown RBP5.35□□□□□ -1.55
PDE4D-228ENST00000636120 PRSS22Q9GZN4 317 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 ANAPC10Q9UM13 185 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 TBL2Q9Y4P3 447 aaKnown RBP5.35□□□□□ -1.55
PDE4D-228ENST00000636120 GPR183P32249 361 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 SUPT4H1P63272 117 aaKnown RBP5.35□□□□□ -1.55
PDE4D-228ENST00000636120 NMSQ5H8A3 153 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 C8orf46Q8TAG6 207 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 WFDC1Q9HC57 220 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 UQCR10Q9UDW1 63 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 CBY3A6NI87 242 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 MDKP21741 143 aaPredicted RBP5.35□□□□□ -1.55
PDE4D-228ENST00000636120 ATP5G3P48201 142 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 HIST1H1AQ02539 215 aaPredicted RBP5.35□□□□□ -1.55
PDE4D-228ENST00000636120 TPTE2P1Q5T6R2 138 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 CLEC19AQ6UXS0 136 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 COL5A1-AS1Q5SY13 56 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 IGHV3-23P01764 117 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 TMEM155Q4W5P6 130 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 Q8TCH9 128 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 RNF125Q96EQ8 232 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 ASCL2Q99929 193 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 TMEM242Q9NWH2 141 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 MOB4Q9Y3A3 225 aa5.35□□□□□ -1.55
PDE4D-228ENST00000636120 OR4C46A6NHA9 309 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 PF4P02776 101 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 C19orf54Q5BKX5 351 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 C12orf54Q6X4T0 127 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 VMO1Q7Z5L0 202 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 TMEM167AQ8TBQ9 72 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 K7ENP7 123 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 SNRPCP09234 159 aaKnown RBP5.34□□□□□ -1.55
PDE4D-228ENST00000636120 RPL23P62829 140 aaKnown RBP5.34□□□□□ -1.55
PDE4D-228ENST00000636120 AMMECR1LQ6DCA0 310 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 KCNS1Q96KK3 526 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 PROK2Q9HC23 129 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 OSTCQ9NRP0 149 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 A0A1B0GUT8 65 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 NPFFO15130 113 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 WNT2P09544 360 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 CACNG7P62955 275 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 CYTL1Q9NRR1 136 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 IGHV1-3A0A0C4DH29 117 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 C5orf52A6NGY3 159 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 M0R3E3 92 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 TIMM23O14925 209 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 IGHV3-48P01763 117 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 NMUP48645 174 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 UNQ6494/PRO21346Q6UXR6 183 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 OR1N2Q8NGR9 330 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 DCAF16Q9NXF7 216 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 EPDR1Q9UM22 224 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 DMRT1Q9Y5R6 373 aa5.34□□□□□ -1.55
PDE4D-228ENST00000636120 PSPNO60542 156 aa5.34□□□□□ -1.56
PDE4D-228ENST00000636120 EGR1P18146 543 aa5.34□□□□□ -1.56
PDE4D-228ENST00000636120 EFNB3Q15768 340 aa5.34□□□□□ -1.56
PDE4D-228ENST00000636120 TRGV9Q99603 122 aa5.34□□□□□ -1.56
PDE4D-228ENST00000636120 MBNL3Q9NUK0 354 aaKnown RBP5.34□□□□□ -1.56
PDE4D-228ENST00000636120 OBSL1O75147 1896 aa5.34□□□□□ -1.56
PDE4D-228ENST00000636120 H0YJW9 148 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 H3BTX0 84 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 PRSS8Q16651 343 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 MDC1Q14676 2089 aaKnown RBP5.33□□□□□ -1.56
PDE4D-228ENST00000636120 EIF3GO75821 320 aaKnown RBP eCLIP5.33□□□□□ -1.56
PDE4D-228ENST00000636120 DUSP14O95147 198 aaKnown RBP5.33□□□□□ -1.56
PDE4D-228ENST00000636120 GATA4P43694 442 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 PLAURQ03405 335 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 ZNF56Q15929 161 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 TMEM14EPQ6UXP3 125 aa5.33□□□□□ -1.56
PDE4D-228ENST00000636120 VOPP1Q96AW1 172 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms