RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 DPM3Q9P2X0 92 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 FUT5Q11128 374 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 ACP7Q6ZNF0 438 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 SAXO1Q8IYX7 474 aa13.53□□□□□ -0.24
CACNA1A-221ENST00000636012 TMEM50AO95807 157 aa13.52□□□□□ -0.24
CACNA1A-221ENST00000636012 FSTP19883 344 aa13.52□□□□□ -0.24
CACNA1A-221ENST00000636012 CTAG1AP78358 180 aa13.52□□□□□ -0.24
CACNA1A-221ENST00000636012 CSRP2Q16527 193 aa13.52□□□□□ -0.24
CACNA1A-221ENST00000636012 GTSF1LQ9H1H1 148 aa13.52□□□□□ -0.24
CACNA1A-221ENST00000636012 AQP3Q92482 292 aa13.52□□□□□ -0.24
CACNA1A-221ENST00000636012 EVI2AP22794 236 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 CD24P25063 80 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 OR5P3Q8WZ94 311 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 MRPL32Q9BYC8 188 aaKnown RBP13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 TMEM250H0YL14 139 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 ZNF250P15622 560 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 ZNF414Q96IQ9 312 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 SMIM6P0DI80 62 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 LIMS1P48059 325 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 C1QTNF12Q5T7M4 302 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 TEX45Q8NA69 505 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 PCNX1Q96RV3 2341 aa13.52□□□□□ -0.25
CACNA1A-221ENST00000636012 CD7P09564 240 aa13.51□□□□□ -0.25
CACNA1A-221ENST00000636012 ZNF79Q15937 498 aa13.51□□□□□ -0.25
CACNA1A-221ENST00000636012 TMEM54Q969K7 222 aa13.51□□□□□ -0.25
CACNA1A-221ENST00000636012 NCR2O95944 276 aa13.51□□□□□ -0.25
CACNA1A-221ENST00000636012 CECR9P0C854 216 aa13.51□□□□□ -0.25
CACNA1A-221ENST00000636012 EFEMP2O95967 443 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 MSGN1A6NI15 193 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 NAPSAO96009 420 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 RIPPLY2Q5TAB7 128 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 SEPSECSQ9HD40 501 aaKnown RBP13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 H0YL77 283 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 FOXA3P55318 350 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 IGLV1-36A0A0B4J1U3 117 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 C5orf66Q9H5L9 145 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 UQCR10Q9UDW1 63 aa13.5□□□□□ -0.25
CACNA1A-221ENST00000636012 ASPHD2Q6ICH7 369 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 ZIC4Q8N9L1 334 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 KBTBD11-OT1A0A1B0GTJ5 212 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 ADARB2-AS1A8MUL3 147 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 NBEAP1P0C6P0 100 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 A0A0G2JMM0 328 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 A0A1W2PPB8 328 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 A0A1W2PRS3 328 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 KIR3DP1A8MWS1 328 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 OR11H12B2RN74 326 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 OR11H1Q8NG94 326 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 NCKAP5O14513 1909 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A26D6RGX4 464 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 NPIPB8E9PQR5 432 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 NPIPB9F8W1W9 429 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 NPIPB7O75200 414 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 TOMM40O96008 361 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 HLA-DQB1P01920 261 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 CELA3BP08861 270 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 GP6Q9HCN6 339 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 CGAP01215 116 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 RPRMQ9NS64 109 aa13.49□□□□□ -0.25
CACNA1A-221ENST00000636012 EP300Q09472 2414 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 TM4SF5O14894 197 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 GCHFRP30047 84 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 Q96M66 194 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 RPL35AP18077 110 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FXYD7P58549 80 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 ESDP10768 282 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 IRF3Q14653 427 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 CLDN16Q9Y5I7 305 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A10PA6NDY2 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A18PA6NE21 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A16PA6NEW6 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A20PA6NIJ5 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A8PA6NJQ4 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A7PA6NKC0 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A22PA8MWA6 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A12PA8MX19 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A5PA8MXJ8 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A23PA8MXZ1 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 F8WEM9 126 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A15PP0C7V4 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A13PP0C7W8 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A14PP0C7W9 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM90A24PP0C7X0 464 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 WFDC6Q9BQY6 131 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 C21orf62Q9NYP8 219 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 MGAMO43451 1857 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 FAM181AQ8N9Y4 354 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 TICRRQ7Z2Z1 1910 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 C8orf46Q8TAG6 207 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 GPR132Q9UNW8 380 aa13.48□□□□□ -0.25
CACNA1A-221ENST00000636012 SMIM8Q96KF7 97 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 IGFBP2P18065 325 aa13.47□□□□□ -0.25
CACNA1A-221ENST00000636012 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms