RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
CLN6-211ENST00000635754 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
CLN6-211ENST00000635754 BMPR1BO00238 502 aa11.9□□□□□ -0.5
CLN6-211ENST00000635754 GGNBP1Q5YKI7 109 aa11.9□□□□□ -0.5
CLN6-211ENST00000635754 CLEC19AQ6UXS0 136 aa11.9□□□□□ -0.5
CLN6-211ENST00000635754 OR52B4Q8NGK2 314 aa11.9□□□□□ -0.5
CLN6-211ENST00000635754 HSPB7Q9UBY9 170 aa11.9□□□□□ -0.5
CLN6-211ENST00000635754 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 IFNA21P01568 189 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 ARL3P36405 182 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 HTR2BP41595 481 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 NRARPQ7Z6K4 114 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 ZNF502Q8TBZ5 544 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 MITD1Q8WV92 249 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 HIPK2Q9H2X6 1198 aa11.89□□□□□ -0.51
CLN6-211ENST00000635754 CORTO00230 105 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 GGCTO75223 188 aaKnown RBP11.88□□□□□ -0.51
CLN6-211ENST00000635754 PITX3O75364 302 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 ADAP1O75689 374 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
CLN6-211ENST00000635754 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
CLN6-211ENST00000635754 TATDN3Q17R31 274 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 C9orf66Q5T8R8 295 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 DUSP18Q8NEJ0 188 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 SCARB1Q8WTV0 552 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
CLN6-211ENST00000635754 SEC22CQ9BRL7 303 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
CLN6-211ENST00000635754 IGHV3-21A0A0B4J1V1 117 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 K7EIM0 57 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 CLEC3BP05452 202 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 GPR183P32249 361 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 SYNJ2BPP57105 145 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 BEAN1Q3B7T3 259 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 BSXQ3C1V8 233 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 PLET1Q6UQ28 207 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 SLC24A4Q8NFF2 622 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 DTD1Q8TEA8 209 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 ZNF431Q8TF32 576 aaPredicted RBP11.87□□□□□ -0.51
CLN6-211ENST00000635754 RBKSQ9H477 322 aa11.87□□□□□ -0.51
CLN6-211ENST00000635754 I3L2K1 104 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 MT-CO2P00403 227 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 KPRPQ5T749 579 aaPredicted RBP11.86□□□□□ -0.51
CLN6-211ENST00000635754 MEGF8Q7Z7M0 2845 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 UBAC2Q8NBM4 344 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 ELOVL1Q9BW60 279 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 TGOLN2O43493 480 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 SAP30O75446 220 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 MED6O75586 246 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 INSL3P51460 131 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 Q56UQ5 140 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 ACSM6Q6P461 480 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
CLN6-211ENST00000635754 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
CLN6-211ENST00000635754 BSCL2Q96G97 398 aaPredicted RBP11.86□□□□□ -0.51
CLN6-211ENST00000635754 GPN1Q9HCN4 374 aaPredicted RBP11.86□□□□□ -0.51
CLN6-211ENST00000635754 GAR1Q9NY12 217 aaKnown RBP11.86□□□□□ -0.51
CLN6-211ENST00000635754 OR2T8A6NH00 312 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 WIPF1O43516 503 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 OR2C1O95371 312 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 IFNA10P01566 189 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 IL5P05113 134 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 NPY1RP25929 384 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 OPRK1P41145 380 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 MFAP4P55083 255 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 SPSB3Q6PJ21 355 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 OR4C12Q96R67 309 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 TXN2Q99757 166 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 ZC4H2Q9NQZ6 224 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 U3KQ87 197 aa11.85□□□□□ -0.51
CLN6-211ENST00000635754 INMT-MINDY4F8WBC2 141 aa11.84□□□□□ -0.51
CLN6-211ENST00000635754 PRAF2O60831 178 aa11.84□□□□□ -0.51
CLN6-211ENST00000635754 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
CLN6-211ENST00000635754 FAM106AQ4KMX7 169 aa11.84□□□□□ -0.51
CLN6-211ENST00000635754 C11orf87Q6NUJ2 197 aa11.84□□□□□ -0.51
CLN6-211ENST00000635754 GPHB5Q86YW7 130 aa11.84□□□□□ -0.51
CLN6-211ENST00000635754 CIB3Q96Q77 187 aaPredicted RBP11.84□□□□□ -0.51
CLN6-211ENST00000635754 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
CLN6-211ENST00000635754 CMYA5Q8N3K9 4069 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
CLN6-211ENST00000635754 SYNGR2O43760 224 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 IGHV3-48P01763 117 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
CLN6-211ENST00000635754 NKX2-1P43699 371 aaPredicted RBP11.83□□□□□ -0.52
CLN6-211ENST00000635754 ATP5IP56385 69 aaPredicted RBP11.83□□□□□ -0.52
CLN6-211ENST00000635754 DEFA6Q01524 100 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 RNASEH2CQ8TDP1 164 aaKnown RBP11.83□□□□□ -0.52
CLN6-211ENST00000635754 OR10C1Q96KK4 312 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 MARVELD1Q9BSK0 173 aa11.83□□□□□ -0.52
CLN6-211ENST00000635754 MAGT1Q9H0U3 335 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms