RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 DBX1A6NMT0 343 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 C15orf61A6NNL5 157 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 P0C879 139 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 ANXA7P20073 488 aaKnown RBP12.4□□□□□ -0.42
LINC00628-201ENST00000628516 KLK9Q2XQG4 91 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 FAM106AQ4KMX7 169 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 LYSTQ99698 3801 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 TMEM14BQ9NUH8 114 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 TECRQ9NZ01 308 aaKnown RBP12.4□□□□□ -0.42
LINC00628-201ENST00000628516 KLK9Q9UKQ9 250 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 TMEM56-RWDD3S4R434 201 aa12.4□□□□□ -0.42
LINC00628-201ENST00000628516 TRBV7-1A0A0A6YYK4 115 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 FAM240BA0A1B0GVZ2 78 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 MFSD2BA6NFX1 497 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 SFT2D2O95562 160 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 TCRBP04435 133 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 CLEC3BP05452 202 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 FGF2P09038 288 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 CD7P09564 240 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 LGI3Q8N145 548 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 IL22RA2Q969J5 263 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 CXorf58Q96LI9 332 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 QTRT1Q9BXR0 403 aaKnown RBP12.39□□□□□ -0.43
LINC00628-201ENST00000628516 C20orf85Q9H1P6 137 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 ZC4H2Q9NQZ6 224 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 SELENOKQ9Y6D0 94 aa12.39□□□□□ -0.43
LINC00628-201ENST00000628516 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 A0A0B4J293 547 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 IGLC7A0M8Q6 106 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 TRAPPC2P0DI81 140 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 TRAPPC2BP0DI82 140 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 CBLN1P23435 193 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
LINC00628-201ENST00000628516 SRPXP78539 464 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 ANKRD55Q3KP44 614 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 DEFB125Q8N687 156 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 SLC35G3Q8N808 338 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 OR10W1Q8NGF6 305 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 WDR89Q96FK6 387 aaPredicted RBP12.38□□□□□ -0.43
LINC00628-201ENST00000628516 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
LINC00628-201ENST00000628516 THYN1Q9P016 225 aa12.38□□□□□ -0.43
LINC00628-201ENST00000628516 TMEM213A2RRL7 107 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 OR11H12B2RN74 326 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 GPR183P32249 361 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 C4orf46Q504U0 113 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 Q6ZRM9 215 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 LYZL2Q7Z4W2 148 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 OR5B3Q8NH48 314 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 GPR146Q96CH1 333 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 WFDC10AQ9H1F0 79 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 NDUFA4L2Q9NRX3 87 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 NUDT15Q9NV35 164 aa12.37□□□□□ -0.43
LINC00628-201ENST00000628516 A0A0B4J2A0 478 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 A8MWP6 167 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 CYB5BO43169 146 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 OR4E1P0C645 316 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 OR13C7P0DN81 318 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 TM4SF20Q53R12 229 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 SPINK9Q5DT21 86 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 THOC7Q6I9Y2 204 aaKnown RBP12.36□□□□□ -0.43
LINC00628-201ENST00000628516 LINC00322Q6ZN03 302 aaPredicted RBP12.36□□□□□ -0.43
LINC00628-201ENST00000628516 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 UXS1Q8NBZ7 420 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 ZNF502Q8TBZ5 544 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 ENKURQ8TC29 256 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 LSM10Q969L4 123 aaKnown RBP12.36□□□□□ -0.43
LINC00628-201ENST00000628516 SRD5A3Q9H8P0 318 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 RETNQ9HD89 108 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 CACNG5Q9UF02 275 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 MLXQ9UH92 298 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 SHPKQ9UHJ6 478 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 TENM2Q9NT68 2774 aa12.36□□□□□ -0.43
LINC00628-201ENST00000628516 IGHV3-35A0A0C4DH35 117 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 RBMY1BA6NDE4 496 aaKnown RBP12.35□□□□□ -0.43
LINC00628-201ENST00000628516 RBMY1EA6NEQ0 496 aaKnown RBP12.35□□□□□ -0.43
LINC00628-201ENST00000628516 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 RBMY1DP0C7P1 496 aaKnown RBP12.35□□□□□ -0.43
LINC00628-201ENST00000628516 DEFA1P59665 94 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 DEFA3P59666 94 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 HSPE1P61604 102 aaKnown RBP12.35□□□□□ -0.43
LINC00628-201ENST00000628516 DHRS2Q13268 280 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 SLC25A24Q6NUK1 477 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 PLET1Q6UQ28 207 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 UNQ9165/PRO28630Q6UXU0 137 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 SLC16A13Q7RTY0 426 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 TMEM61Q8N0U2 210 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 HIPK2Q9H2X6 1198 aa12.35□□□□□ -0.43
LINC00628-201ENST00000628516 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
LINC00628-201ENST00000628516 IFNA17P01571 189 aa12.34□□□□□ -0.43
LINC00628-201ENST00000628516 PRCDQ00LT1 54 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms