RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 TOMM20LQ6UXN7 152 aa12.41□□□□□ -0.42
LINC00552-201ENST00000625151 CCL13Q99616 98 aa12.41□□□□□ -0.42
LINC00552-201ENST00000625151 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
LINC00552-201ENST00000625151 RAB9BQ9NP90 201 aa12.41□□□□□ -0.42
LINC00552-201ENST00000625151 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
LINC00552-201ENST00000625151 GATA4P43694 442 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 PAFAH1B2P68402 229 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 HSPB9Q9BQS6 159 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 TMEM167BQ9NRX6 74 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 IL19Q9UHD0 177 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 ARL2-SNX15V9GYD0 113 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 OR7C2O60412 319 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 SPINK4O60575 86 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 OR10J4P0C629 311 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 CDKN1AP38936 164 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 DEFB109BQ30KR1 87 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 SLC35D1Q9NTN3 355 aa12.4□□□□□ -0.42
LINC00552-201ENST00000625151 FXYD3Q14802 87 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 BAGE2Q86Y30 109 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 OR9G1Q8NH87 305 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 TECRQ9NZ01 308 aaKnown RBP12.39□□□□□ -0.43
LINC00552-201ENST00000625151 IGHV1-46P01743 117 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 SLC25A48Q6ZT89 311 aaKnown RBP12.39□□□□□ -0.43
LINC00552-201ENST00000625151 OR10W1Q8NGF6 305 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 RND1Q92730 232 aa12.39□□□□□ -0.43
LINC00552-201ENST00000625151 APC2O95996 2303 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 DLEU1O43261 78 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
LINC00552-201ENST00000625151 SLC35B1P78383 322 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 TNFAIP6P98066 277 aaPredicted RBP12.38□□□□□ -0.43
LINC00552-201ENST00000625151 SLC35E1Q96K37 410 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 SCNM1Q9BWG6 230 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 RPUSD1Q9UJJ7 312 aaKnown RBP12.38□□□□□ -0.43
LINC00552-201ENST00000625151 RP1L1Q8IWN7 2480 aaPredicted RBP12.38□□□□□ -0.43
LINC00552-201ENST00000625151 M0R143 59 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 OR5G3P0C626 314 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
LINC00552-201ENST00000625151 RANP62826 216 aaKnown RBP12.38□□□□□ -0.43
LINC00552-201ENST00000625151 Q0VG73 95 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 RTL8BQ17RB0 113 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 TEX43Q6ZNM6 134 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 ZNF788Q6ZQV5 615 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 C22orf34Q6ZV56 151 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 GNB1LQ9BYB4 327 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 FAM215AQ9Y5M1 114 aa12.38□□□□□ -0.43
LINC00552-201ENST00000625151 TMEM11P17152 192 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 TCL1AP56279 114 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 SUMO1P63165 101 aaKnown RBP12.37□□□□□ -0.43
LINC00552-201ENST00000625151 CX3CL1P78423 397 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 OR5AU1Q8NGC0 362 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 LINC00574Q9H8X3 128 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 RNF114Q9Y508 228 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 ZZEF1O43149 2961 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 ANKRD11Q6UB99 2663 aaPredicted RBP12.37□□□□□ -0.43
LINC00552-201ENST00000625151 IGLV2-8P01709 118 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 ZNF25P17030 456 aaPredicted RBP12.37□□□□□ -0.43
LINC00552-201ENST00000625151 MORN5Q5VZ52 161 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 SAMD10Q9BYL1 202 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 NAT8BQ9UHF3 227 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 NAV3Q8IVL0 2385 aa12.37□□□□□ -0.43
LINC00552-201ENST00000625151 TRBV9A0A0B4J1U6 114 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 KLK10O43240 276 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 KIAA1644Q3SXP7 199 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 TIGITQ495A1 244 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 OSTCQ9NRP0 149 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 COMPP49747 757 aaPredicted RBP12.36□□□□□ -0.43
LINC00552-201ENST00000625151 TDGF1P3P51864 188 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 CD69Q07108 199 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 ZNF705AQ6ZN79 300 aaPredicted RBP12.36□□□□□ -0.43
LINC00552-201ENST00000625151 TMEM136Q6ZRR5 245 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 OR1L8Q8NGR8 309 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 VN1R17PQ8TDU5 208 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 IGF2BP2-AS1Q96M15 143 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 SLC25A33Q9BSK2 321 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 BET1LQ9NYM9 111 aa12.36□□□□□ -0.43
LINC00552-201ENST00000625151 CHTOPQ9Y3Y2 248 aaKnown RBP12.36□□□□□ -0.43
LINC00552-201ENST00000625151 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 TAS2R45P59539 299 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
LINC00552-201ENST00000625151 PAM16Q9Y3D7 125 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 C8orf88P0DMB2 117 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 MGST1P10620 155 aaKnown RBP12.35□□□□□ -0.43
LINC00552-201ENST00000625151 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 PNKDQ8N490 385 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 OR2T6Q8NHC8 308 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 FAM103A1Q9BTL3 118 aaKnown RBP12.35□□□□□ -0.43
LINC00552-201ENST00000625151 FBXL7Q9UJT9 491 aa12.35□□□□□ -0.43
LINC00552-201ENST00000625151 PSMB11A5LHX3 300 aa12.34□□□□□ -0.43
LINC00552-201ENST00000625151 E7EUB6 86 aa12.34□□□□□ -0.43
LINC00552-201ENST00000625151 ISLRO14498 428 aa12.34□□□□□ -0.43
LINC00552-201ENST00000625151 PPOXP50336 477 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms