RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 PGPEP1LA6NFU8 196 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 DLL1O00548 723 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 ACTL6BO94805 426 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR10J1P30954 320 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 LCN2P80188 198 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 CD69Q07108 199 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 DIAPH2-AS1Q14236 149 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 TMEM155Q4W5P6 130 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 PYY3Q5JQD4 70 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 MIR17HGQ75NE6 70 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR9G1Q8NH87 305 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 ST6GALNAC6Q969X2 333 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 SFRP2Q96HF1 295 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 UHRF2Q96PU4 802 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 C19orf24Q9BVV8 132 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 CHODLQ9H9P2 273 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 TMEM167BQ9NRX6 74 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 WASHC3Q9Y3C0 194 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 ARL2-SNX15V9GYD0 113 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 HIVEP3Q5T1R4 2406 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 ACACBO00763 2458 aa6.75□□□□□ -1.33
SND1-IT1-201ENST00000623342 TRBV20OR9-2A0A075B6H5 130 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 MDFIC2A0A1B0GVS7 189 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 A0A1W2PN81 502 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 B9A039 149 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 CD3EP07766 207 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 AREGP15514 252 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 GPX4P36969 197 aaPredicted RBP6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 ZNF137PP52743 207 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 ACTL10Q5JWF8 245 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 PNKDQ8N490 385 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 CACNG8Q8WXS5 425 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 TECRQ9NZ01 308 aaKnown RBP6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 FAM87AP0C7U9 286 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 IGHV1-8P0DP01 117 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 FABP4P15090 132 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 MC5RP33032 325 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 FOXL1Q12952 345 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 PSG5Q15238 335 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 MLANAQ16655 118 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 TGIF2LXQ8IUE1 241 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 OCC1Q8TAD7 63 aa6.74□□□□□ -1.33
SND1-IT1-201ENST00000623342 TRBV23-1A0A0A0MS06 115 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 LINC00587B1AMM8 73 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 C9JCJ5 164 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 E7EUB6 86 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR5G3P0C626 314 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 GATA2P23769 480 aaPredicted RBP6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 IL3RAP26951 378 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 TAS2R45P59539 299 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 HLA-DRB5Q30154 266 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 PQLC2Q6ZP29 291 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 ACY3Q96HD9 319 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 XKRY2A2RUG3 117 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 IGHV2-70P01814 119 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 COL8A2P25067 703 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 SUB1P53999 127 aaKnown RBP eCLIP6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 VMA21Q3ZAQ7 101 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 COA6Q5JTJ3 125 aaKnown RBP6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 TEX38Q6PEX7 206 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR10G8Q8NGN5 311 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR1P1Q8NH06 330 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR2T6Q8NHC8 308 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 SGMS2Q8NHU3 365 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 RNASEH2CQ8TDP1 164 aaKnown RBP6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 HIST1H2BLQ99880 126 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 TMEM133Q9H2Q1 129 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 ZNF430Q9H8G1 570 aaPredicted RBP6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 LY96Q9Y6Y9 160 aa6.73□□□□□ -1.33
SND1-IT1-201ENST00000623342 ANKHD1Q8IWZ3 2542 aaKnown RBP6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 A0A0U1RQK1 487 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 ZNF320A2RRD8 509 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 CGB1A6NKQ9 187 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 OR7C2O60412 319 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 HNF1AP20823 631 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 CASP6P55212 293 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 WT1-ASQ06250 92 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 C11orf42Q8N5U0 333 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 TMEM37Q8WXS4 190 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 PACRGQ96M98 296 aaPredicted RBP6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 RNF2Q99496 336 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 MRPL32Q9BYC8 188 aaKnown RBP6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 DMRT1Q9Y5R6 373 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 TNCP24821 2201 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 SLC25A17O43808 307 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 PLAUP00749 431 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 C8orf88P0DMB2 117 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 LGALS7P47929 136 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 PPOXP50336 477 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 C10orf55Q5SWW7 151 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 TNFRSF14Q92956 283 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 SLC25A33Q9BSK2 321 aa6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 RALYQ9UKM9 306 aaKnown RBP6.72□□□□□ -1.33
SND1-IT1-201ENST00000623342 K7EN84 100 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms