RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TMEM14BQ9NUH8 114 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 JPT1Q9UK76 154 aa11.56□□□□□ -0.56
LDB3-209ENST00000623056 PPBPP02775 128 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 GPR6P46095 362 aaPredicted RBP11.55□□□□□ -0.56
LDB3-209ENST00000623056 LRRC10Q5BKY1 277 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 PEAR1Q5VY43 1037 aaPredicted RBP11.55□□□□□ -0.56
LDB3-209ENST00000623056 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
LDB3-209ENST00000623056 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 OR4S2Q8NH73 311 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 DDB2Q92466 427 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 ST6GALNAC6Q969X2 333 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 MBD6Q96DN6 1003 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 HINT2Q9BX68 163 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 ZNF355PQ9NSJ1 428 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 FOXA2Q9Y261 457 aaPredicted RBP11.55□□□□□ -0.56
LDB3-209ENST00000623056 IGKV1OR2-108A0A075B7D4 117 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 FNDC10F2Z333 226 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 KIR2DS2P43631 304 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 TAS2R45P59539 299 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 RHOGP84095 191 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 OR4A47Q6IF82 309 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 LINC00479Q96M42 142 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 SSBP4Q9BWG4 385 aaPredicted RBP11.55□□□□□ -0.56
LDB3-209ENST00000623056 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
LDB3-209ENST00000623056 MPV17L2Q567V2 206 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 TRIB1Q96RU8 372 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 CLCF1Q9UBD9 225 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 RNF24Q9Y225 148 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 C21orf140B9A014 251 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 TAX1BP3O14907 124 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 RTL8BQ17RB0 113 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 ABHD17BQ5VST6 288 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 GRAMD2BQ96HH9 432 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 TMEM70Q9BUB7 260 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 GPR179Q6PRD1 2367 aa11.54□□□□□ -0.56
LDB3-209ENST00000623056 OR2J3O76001 311 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 LOXL3P58215 753 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 ZNF596Q8TC21 504 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 SNRNP40Q96DI7 357 aaKnown RBP11.53□□□□□ -0.56
LDB3-209ENST00000623056 URB1-AS1Q96HZ7 61 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 OR4C46A6NHA9 309 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 CER1O95813 267 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 C8orf88P0DMB2 117 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 PRDX2P32119 198 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 CA7P43166 264 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 UTF1Q5T230 341 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 FAM231DQ6ZW35 169 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 NUDT10Q8NFP7 164 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 NUDT11Q96G61 164 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 SLC25A33Q9BSK2 321 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 ST20Q9HBF5 79 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 NBEAQ8NFP9 2946 aa11.53□□□□□ -0.56
LDB3-209ENST00000623056 M0R296 226 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 CAMPP49913 170 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 C6orf15Q6UXA7 325 aaPredicted RBP11.52□□□□□ -0.57
LDB3-209ENST00000623056 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 DUSP13Q9UII6 198 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 OR51B2Q9Y5P1 312 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 SH2D7A6NKC9 451 aaPredicted RBP11.52□□□□□ -0.57
LDB3-209ENST00000623056 UBE2L3P68036 154 aaKnown RBP11.52□□□□□ -0.57
LDB3-209ENST00000623056 PRR31Q5SQ13 230 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 LRRC29Q8WV35 223 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 LEAP2Q969E1 77 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 VPS25Q9BRG1 176 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 FZR1Q9UM11 496 aa11.52□□□□□ -0.57
LDB3-209ENST00000623056 CBY3A6NI87 242 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 TIMM8AO60220 97 aaPredicted RBP11.51□□□□□ -0.57
LDB3-209ENST00000623056 LYZL6O75951 148 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 NUDT3O95989 172 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 PSG1P11464 419 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 IGHV1-2P23083 117 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 RPS20P60866 119 aaKnown RBP11.51□□□□□ -0.57
LDB3-209ENST00000623056 OCIAD2Q56VL3 154 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 LINC00696Q6ZRV3 163 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 OR9G1Q8NH87 305 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 OR2T6Q8NHC8 308 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 FAM167A-AS1Q96KT0 104 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 SLC25A2Q9BXI2 301 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 F2RL2O00254 374 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 MLANAQ16655 118 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 ARRDC1-AS1Q9H2J1 176 aa11.51□□□□□ -0.57
LDB3-209ENST00000623056 AMMECR1Q9Y4X0 333 aaPredicted RBP11.51□□□□□ -0.57
LDB3-209ENST00000623056 IGKV1D-17A0A075B6S4 117 aa11.5□□□□□ -0.57
LDB3-209ENST00000623056 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
LDB3-209ENST00000623056 J3QR06 171 aa11.5□□□□□ -0.57
LDB3-209ENST00000623056 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
LDB3-209ENST00000623056 PRR27Q6MZM9 219 aa11.5□□□□□ -0.57
LDB3-209ENST00000623056 VWC2LB2RUY7 222 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 CORTO00230 105 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms