RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
NPHP4-211ENST00000622020 ZNF891A8MT65 544 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-211ENST00000622020 LINC00614P0C842 121 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 CD24P25063 80 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 CX3CL1P78423 397 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 SLAQ13239 276 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 PPP1R35Q8TAP8 253 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 ZNF318Q5VUA4 2279 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 C9JCJ5 164 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 C3orf79P0CE67 100 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 APELAP0DMC3 54 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 AREGP15514 252 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 CDC42EP3Q9UKI2 254 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 SLC45A2Q9UMX9 530 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 USF1P22415 310 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-211ENST00000622020 RAB7AP51149 207 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 AARDQ4LEZ3 155 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 Q8N976 141 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
NPHP4-211ENST00000622020 A0A1W2PN81 502 aa12.87□□□□□ -0.35
NPHP4-211ENST00000622020 CD59P13987 128 aa12.87□□□□□ -0.35
NPHP4-211ENST00000622020 Q0VG73 95 aa12.87□□□□□ -0.35
NPHP4-211ENST00000622020 TRAT1Q6PIZ9 186 aa12.87□□□□□ -0.35
NPHP4-211ENST00000622020 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
NPHP4-211ENST00000622020 TECRQ9NZ01 308 aaKnown RBP12.87□□□□□ -0.35
NPHP4-211ENST00000622020 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
NPHP4-211ENST00000622020 STPG4Q8N801 248 aa12.87□□□□□ -0.35
NPHP4-211ENST00000622020 NEUROG1Q92886 237 aa12.87□□□□□ -0.35
NPHP4-211ENST00000622020 TRGV8A0A0C4DH27 118 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 E7EUB6 86 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 WT1P19544 449 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-211ENST00000622020 MFAP2P55001 183 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 H3BTX0 84 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 APCSP02743 223 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 CHRNB4P30926 498 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 HINT1P49773 126 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-211ENST00000622020 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 KCNS1Q96KK3 526 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 FOXA2Q9Y261 457 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-211ENST00000622020 COL27A1Q8IZC6 1860 aaPredicted RBP12.86□□□□□ -0.35
NPHP4-211ENST00000622020 TEX50A0A1B0GTY4 177 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 DPRXA6NFQ7 191 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 FAM90A9PA6NNJ1 464 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 F2RL2O00254 374 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 IGLV2-8P01709 118 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 GNG5P63218 68 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 PMCHL1Q16048 86 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 ERASQ7Z444 233 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
NPHP4-211ENST00000622020 TSKUQ8WUA8 353 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 RNF2Q99496 336 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 TMEM167BQ9NRX6 74 aa12.86□□□□□ -0.35
NPHP4-211ENST00000622020 PIEZO2Q9H5I5 2752 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 KBTBD11-OT1A0A1B0GTJ5 212 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-211ENST00000622020 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-211ENST00000622020 ESDP10768 282 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
NPHP4-211ENST00000622020 Q56UQ5 140 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 C1orf174Q8IYL3 243 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 ZNF331Q9NQX6 463 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-211ENST00000622020 M0QZ24 198 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 CORTO00230 105 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 REG1AP05451 166 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 BHLHA15Q7RTS1 189 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-211ENST00000622020 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 BORCS7Q96B45 105 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 TIMM8BQ9Y5J9 83 aaPredicted RBP12.85□□□□□ -0.35
NPHP4-211ENST00000622020 DYSFO75923 2080 aa12.85□□□□□ -0.35
NPHP4-211ENST00000622020 TTC28Q96AY4 2481 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 IGHV3-21A0A0B4J1V1 117 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 HYPMO75409 117 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-211ENST00000622020 CT45A6P0DMU7 189 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 CT45A5P0DMU8 189 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 CT45A7P0DMV0 189 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 NIT1Q86X76 327 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 PROCRQ9UNN8 238 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 AMY1AP04745 511 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
NPHP4-211ENST00000622020 TNXAQ16473 311 aa12.84□□□□□ -0.35
NPHP4-211ENST00000622020 RNASEKQ6P5S7 137 aaKnown RBP12.84□□□□□ -0.35
NPHP4-211ENST00000622020 ZNF71Q9NQZ8 489 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-211ENST00000622020 OR5G3P0C626 314 aa12.83□□□□□ -0.35
NPHP4-211ENST00000622020 COL5A1-AS1Q5SY13 56 aa12.83□□□□□ -0.35
NPHP4-211ENST00000622020 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.35
NPHP4-211ENST00000622020 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.35
NPHP4-211ENST00000622020 ST6GALNAC6Q969X2 333 aa12.83□□□□□ -0.35
NPHP4-211ENST00000622020 SLC25A33Q9BSK2 321 aa12.83□□□□□ -0.35
NPHP4-211ENST00000622020 CLEC7AQ9BXN2 247 aa12.83□□□□□ -0.35
NPHP4-211ENST00000622020 SH2D7A6NKC9 451 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-211ENST00000622020 PRB3Q04118 309 aaPredicted RBP12.83□□□□□ -0.36
NPHP4-211ENST00000622020 WDR73Q6P4I2 378 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms