RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
TARDBP-225ENST00000621715 SSR3Q9UNL2 185 aa12.13□□□□□ -0.47
TARDBP-225ENST00000621715 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
TARDBP-225ENST00000621715 MRPS14O60783 128 aaKnown RBP12.12□□□□□ -0.47
TARDBP-225ENST00000621715 SNAPC5O75971 98 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 HLA-DMBP28068 263 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 TGFBR1P36897 503 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 MFAP4P55083 255 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 IZUMO4Q1ZYL8 232 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 PRNDQ9UKY0 176 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 X6R8D5 127 aa12.12□□□□□ -0.47
TARDBP-225ENST00000621715 A0A0A6YYH2 397 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 A0A1B0GU03 582 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 A6NJ64 397 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 CMC4P56277 68 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-225ENST00000621715 SCAND1P57086 179 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 TCTAP57738 103 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 ZNF114Q8NC26 417 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
TARDBP-225ENST00000621715 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 TMEM56Q96MV1 263 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 HRH4Q9H3N8 390 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 MRPL36Q9P0J6 103 aaKnown RBP12.11□□□□□ -0.47
TARDBP-225ENST00000621715 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
TARDBP-225ENST00000621715 HSPG2P98160 4391 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 IGHV4-4A0A075B6R2 117 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 LOC100506127A0A0U1RQW1 187 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 ST8SIA3O43173 380 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
TARDBP-225ENST00000621715 LYSMD2Q8IV50 215 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 TXN2Q99757 166 aa12.1□□□□□ -0.47
TARDBP-225ENST00000621715 KNCNA6PVL3 124 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 NAT1P18440 290 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 CBX5P45973 191 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 HSPA13P48723 471 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 PRCDQ00LT1 54 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 CMTM3Q96MX0 182 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 IFT46Q9NQC8 304 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 DIABLOQ9NR28 239 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 CLEC5AQ9NY25 188 aa12.09□□□□□ -0.47
TARDBP-225ENST00000621715 PUS1Q9Y606 427 aaKnown RBP eCLIP12.09□□□□□ -0.47
TARDBP-225ENST00000621715 ZNF705EA8MWA4 302 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-225ENST00000621715 C11orf94C9JXX5 98 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 GPR31O00270 319 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 RTL8CO15255 209 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 GNG7O60262 68 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 CSNK1G2-AS1Q8NCQ2 148 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 TSPAN14Q8NG11 270 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 MRGPRFQ96AM1 343 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 KRTAP4-5Q9BYR2 181 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 FKBP11Q9NYL4 201 aa12.08□□□□□ -0.48
TARDBP-225ENST00000621715 K7EQG2 157 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
TARDBP-225ENST00000621715 HRH1P35367 487 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 TAS2R20P59543 309 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 RPL11P62913 178 aaKnown RBP12.07□□□□□ -0.48
TARDBP-225ENST00000621715 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 MLANAQ16655 118 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 TBC1D26Q86UD7 250 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 OR5H2Q8NGV7 314 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 RABAC1Q9UI14 185 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 RAB26Q9ULW5 256 aa12.07□□□□□ -0.48
TARDBP-225ENST00000621715 TRAV2A0A0B4J234 112 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 HLA-DMAP28067 261 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 PPP5CP53041 499 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 STHQ8IWL8 128 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 CMTM1Q8IZ96 169 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 FCGR1BQ92637 280 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 BORCS5Q969J3 196 aa12.06□□□□□ -0.48
TARDBP-225ENST00000621715 TRAV10A0A0B4J240 114 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 TMEM50AO95807 157 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
TARDBP-225ENST00000621715 C12orf74Q32Q52 190 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 ZNF600Q6ZNG1 722 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 DUSP18Q8NEJ0 188 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 OR4A16Q8NH70 328 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 TSC22D3Q99576 134 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
TARDBP-225ENST00000621715 FNDC4Q9H6D8 234 aaPredicted RBP12.05□□□□□ -0.48
TARDBP-225ENST00000621715 M0R2N4 97 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 IGKV1-5P01602 117 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 EIF4EP06730 217 aaKnown RBP12.04□□□□□ -0.48
TARDBP-225ENST00000621715 P0C879 139 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 MIFP14174 115 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 STXBP6Q8NFX7 210 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 OR6F1Q8NGZ6 308 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 VCX3BQ9H321 246 aa12.04□□□□□ -0.48
TARDBP-225ENST00000621715 A0A0B4J293 547 aa12.03□□□□□ -0.48
TARDBP-225ENST00000621715 MED14OSP0DP75 135 aa12.03□□□□□ -0.48
TARDBP-225ENST00000621715 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
TARDBP-225ENST00000621715 TAS2R46P59540 309 aa12.03□□□□□ -0.48
TARDBP-225ENST00000621715 ACTL10Q5JWF8 245 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms