RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ZFP57Q9NU63 452 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 KIAA1456Q9P272 454 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 PSG5Q15238 335 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 IGFL4Q6B9Z1 124 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 OR1L8Q8NGR8 309 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 ZNF596Q8TC21 504 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 SRSF12Q8WXF0 261 aaKnown RBP8.43□□□□□ -1.06
VPS11-208ENST00000621676 RAB9BQ9NP90 201 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 COA4Q9NYJ1 87 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 PXMP4Q9Y6I8 212 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 SPINK4O60575 86 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 TSPAN9O75954 239 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 IGLV1-47P01700 117 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 BLCAPP62952 87 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 OR5AN1Q8NGI8 311 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 IL22RA2Q969J5 263 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 Q96MF0 132 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 PIMREGQ9BSJ6 248 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 KAAG1Q9UBP8 84 aa8.43□□□□□ -1.06
VPS11-208ENST00000621676 UMAD1C9J7I0 102 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 VENTXO95231 258 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 CTRB1P17538 263 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 NDPQ00604 133 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 CTRB2Q6GPI1 263 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 CORO2AQ92828 525 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 TBX15Q96SF7 602 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 P2RX4Q99571 388 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 TMEM218A2RU14 115 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 PYYP10082 97 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 LYZP61626 148 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 CX3CL1P78423 397 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 TMEM14EPQ6UXP3 125 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 ZNF833PQ6ZTB9 187 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 MIR17HGQ75NE6 70 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 C2CD4CQ8TF44 421 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 ST6GALNAC6Q969X2 333 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 MGST2Q99735 147 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 WNT10AQ9GZT5 417 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 BEX4Q9NWD9 120 aaPredicted RBP8.42□□□□□ -1.06
VPS11-208ENST00000621676 SIGLEC9Q9Y336 463 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 FGF2P09038 288 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 LYL1P12980 280 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 GAMTQ14353 236 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 TPTE2P1Q5T6R2 138 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 STPG3Q8N7X2 389 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 TMEM147Q9BVK8 224 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 NBEAL2Q6ZNJ1 2754 aa8.42□□□□□ -1.06
VPS11-208ENST00000621676 H3BUX3 64 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 HOXB4P17483 251 aaPredicted RBP8.41□□□□□ -1.06
VPS11-208ENST00000621676 ATP5G3P48201 142 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 DVL1P1P54792 670 aaPredicted RBP8.41□□□□□ -1.06
VPS11-208ENST00000621676 LRRC75BQ2VPJ9 315 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 KHDC1LQ5JSQ8 128 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 SOHLH1Q5JUK2 328 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 SSX3Q99909 188 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 HSPB9Q9BQS6 159 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
VPS11-208ENST00000621676 CENPVL3A0A0U1RRI6 287 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 MT-CO2P00403 227 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 VDAC2P45880 294 aaPredicted RBP8.41□□□□□ -1.06
VPS11-208ENST00000621676 MFAP2P55001 183 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 C10orf99Q6UWK7 81 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 GINS3Q9BRX5 216 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 C11orf1Q9H5F2 150 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 PRNDQ9UKY0 176 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 TRBV23-1A0A0A0MS06 115 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 OR2T8A6NH00 312 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 CGB1A6NKQ9 187 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 SEC11BP0C7V7 166 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 ARL14EPLP0DKL9 152 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 PRTN3P24158 256 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 CR1LQ2VPA4 569 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 Q5PR19 223 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 ADTRPQ96IZ2 230 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 LINC00479Q96M42 142 aa8.41□□□□□ -1.06
VPS11-208ENST00000621676 CIB3Q96Q77 187 aaPredicted RBP8.41□□□□□ -1.06
VPS11-208ENST00000621676 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
VPS11-208ENST00000621676 SPNS3Q6ZMD2 512 aa8.4□□□□□ -1.06
VPS11-208ENST00000621676 TNFRSF14Q92956 283 aa8.4□□□□□ -1.06
VPS11-208ENST00000621676 ARV1Q9H2C2 271 aa8.4□□□□□ -1.06
VPS11-208ENST00000621676 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
VPS11-208ENST00000621676 A0A1W2PN81 502 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 RBFOX3A6NFN3 312 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 IGLV2-23P01705 113 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 CHRNA7P36544 502 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 RANP62826 216 aaKnown RBP8.4□□□□□ -1.07
VPS11-208ENST00000621676 ADIRFQ15847 76 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 PRSS8Q16651 343 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 TEPPQ6URK8 271 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 OR4X1Q8NH49 305 aa8.4□□□□□ -1.07
VPS11-208ENST00000621676 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.07
VPS11-208ENST00000621676 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 LINC00869P0C866 280 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 P0C879 139 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 CDC34P49427 236 aaPredicted RBP8.39□□□□□ -1.07
VPS11-208ENST00000621676 SLC35B1P78383 322 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 Q56UQ5 140 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 UNQ5815/PRO19632Q6UWF5 114 aa8.39□□□□□ -1.07
VPS11-208ENST00000621676 OSR1Q8TAX0 266 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms