RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TPSG1Q9NRR2 321 aa8.05□□□□□ -1.12
VTA1-205ENST00000620996 REG1AP05451 166 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 LINC00614P0C842 121 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 GZMBP10144 247 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 SPSB3Q6PJ21 355 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 PCGF1Q9BSM1 259 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 CD5P06127 495 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 CXCL1P09341 107 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 CD24P25063 80 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 CNTFRP26992 372 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 CDC34P49427 236 aaPredicted RBP8.04□□□□□ -1.12
VTA1-205ENST00000620996 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 SERF2P84101 59 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 HES1Q14469 280 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 LINC00311Q8N616 119 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 ZNF596Q8TC21 504 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 FKBP11Q9NYL4 201 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 USP24Q9UPU5 2620 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 BUB1B-PAK6H3BSN5 160 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 M0QZ24 198 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 TRGC1P0CF51 173 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 PRCDQ00LT1 54 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 TNXAQ16473 311 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 GCSAMLQ5JQS6 135 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 LYPD6BQ8NI32 183 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 VSTM2AQ8TAG5 236 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 BET1LQ9NYM9 111 aa8.04□□□□□ -1.12
VTA1-205ENST00000620996 TNCP24821 2201 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 IGHV3-48P01763 117 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 MC5RP33032 325 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 EFNA4P52798 201 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 ZNF726P1Q15940 193 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 TMEM177Q53S58 311 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 Q6ZVH6 145 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 OR1L8Q8NGR8 309 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 ST6GALNAC6Q969X2 333 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 ZNF430Q9H8G1 570 aaPredicted RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 AMMECR1Q9Y4X0 333 aaPredicted RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 TET2Q6N021 2002 aaPredicted RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 IGHV1-3A0A0C4DH29 117 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 CIDEAO60543 219 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 IGKV1D-33P01593 117 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 IGKV1-33P01594 117 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 USF1P22415 310 aaPredicted RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 SOHLH1Q5JUK2 328 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 MIC13Q5XKP0 118 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 DPPA3Q6W0C5 159 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 TMEM170AQ8WVE7 144 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 BPESC1Q9GZL8 116 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 SLC35B3Q9H1N7 401 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 KPTNQ9Y664 436 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 ASH1LQ9NR48 2969 aaKnown RBP8.03□□□□□ -1.12
VTA1-205ENST00000620996 FLNCQ14315 2725 aa8.03□□□□□ -1.12
VTA1-205ENST00000620996 WNK2Q9Y3S1 2297 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 A0A1W2PPV4 95 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 A1L4Q6 167 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 POU2AF1Q16633 256 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 TEX38Q6PEX7 206 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 FRZBQ92765 325 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 KIAA1456Q9P272 454 aa8.02□□□□□ -1.12
VTA1-205ENST00000620996 HTR1DP28221 377 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 ACOT6Q3I5F7 207 aaPredicted RBP8.02□□□□□ -1.13
VTA1-205ENST00000620996 TREML4Q6UXN2 200 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 ERASQ7Z444 233 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 LHFPL4Q7Z7J7 247 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 RPP25LQ8N5L8 163 aaKnown RBP8.02□□□□□ -1.13
VTA1-205ENST00000620996 OR4P4Q8NGL7 312 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 OR5B3Q8NH48 314 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 ACY3Q96HD9 319 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 CCL19Q99731 98 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
VTA1-205ENST00000620996 C20orf202A1L168 122 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 E7EUB6 86 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 IGLV1-47P01700 117 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 LGALS4P56470 323 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 MLANAQ16655 118 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 HCP5Q6MZN7 132 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 FAM71F2Q6NXP2 309 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 C8orf31Q8N9H6 132 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 Q8WTZ3 238 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 BBC3Q96PG8 261 aaPredicted RBP8.02□□□□□ -1.13
VTA1-205ENST00000620996 WDR83OSQ9Y284 106 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 TIMM9Q9Y5J7 89 aa8.02□□□□□ -1.13
VTA1-205ENST00000620996 ZNF462Q96JM2 2506 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 TIMM23O14925 209 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 ZFP36P26651 326 aaKnown RBP8.01□□□□□ -1.13
VTA1-205ENST00000620996 VMO1Q7Z5L0 202 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 Q8N7P7 452 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 CYB561D1Q8N8Q1 229 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 TNFRSF14Q92956 283 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 FBXL15Q9H469 300 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 NPVFQ9HCQ7 196 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 ZNF257Q9Y2Q1 563 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 PXMP4Q9Y6I8 212 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 A0A1W2PPQ1 181 aa8.01□□□□□ -1.13
VTA1-205ENST00000620996 ZNF705FA8MVS1 300 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms