RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TRAV24A0A0B4J272 114 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 FAM90A9PA6NNJ1 464 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 SFTA2Q6UW10 78 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 WFDC12Q8WWY7 111 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 HIST1H2BLQ99880 126 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 HILPDAQ9Y5L2 63 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 KIAA1551Q9HCM1 1747 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 ADAMTS9Q9P2N4 1935 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 TM4SF5O14894 197 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 LHX2P50458 406 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 FAM74A4Q5TZK3 123 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 Q8NFD4 153 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 OR9G1Q8NH87 305 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 Q96M66 194 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 IL6RP08887 468 aaPredicted RBP6.09□□□□□ -1.43
COLCA1-205ENST00000620864 FOXL1Q12952 345 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 C1QL3Q5VWW1 255 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 MYEOVQ96EZ4 313 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 OR2H2O95918 312 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 TDGF1P13385 188 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 DUX5Q96PT3 197 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 ZNF703Q9H7S9 590 aaPredicted RBP6.09□□□□□ -1.43
COLCA1-205ENST00000620864 HEATR5BQ9P2D3 2071 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 A0A1W2PRX2 142 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 GAGE12BA1L429 117 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 UMODP07911 640 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 OCIAD2Q56VL3 154 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 C1orf122Q6ZSJ8 110 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 NEGR1Q7Z3B1 354 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 ESPL1Q14674 2120 aa6.09□□□□□ -1.43
COLCA1-205ENST00000620864 A0A1B0GTL3 188 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 ITGB1BP1O14713 200 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 TEX45Q8NA69 505 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 MRPL27Q9P0M9 148 aaKnown RBP6.09□□□□□ -1.44
COLCA1-205ENST00000620864 LY75O60449 1722 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.44
COLCA1-205ENST00000620864 A0A1W2PRE2 83 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 FABP5P3A8MUU1 101 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 PDLIM4P50479 330 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 UNQ5815/PRO19632Q6UWF5 114 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 SLC25A48Q6ZT89 311 aaKnown RBP6.09□□□□□ -1.44
COLCA1-205ENST00000620864 SLC25A28Q96A46 364 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 CALYQ9NYX4 217 aa6.09□□□□□ -1.44
COLCA1-205ENST00000620864 ADAMTSL1Q8N6G6 1762 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 COL4A5P29400 1685 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 IGHV3OR16-10A0A075B7F0 116 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 A0A0J9YW62 118 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 FOXA3P55318 350 aaPredicted RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 RBMY1FQ15415 496 aaKnown RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 HIST3H2BBQ8N257 126 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 IFI27L1Q96BM0 104 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 TRPM6Q9BX84 2022 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 F8WEM9 126 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 NTN1O95631 604 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 RPL23P62829 140 aaKnown RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 GAGE1Q13065 139 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 IGHMP01871 453 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 IFITM1P13164 125 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 FAM166AQ6J272 317 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 ST6GALNAC6Q969X2 333 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 VKORC1Q9BQB6 163 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 IFI27L2Q9H2X8 130 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 PSMB11A5LHX3 300 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 DUTP33316 252 aaKnown RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 LAGE3Q14657 143 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 RASL10BQ96S79 203 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 LY96Q9Y6Y9 160 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 F8W1H4 67 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 ZG16O60844 167 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 LIMS1P48059 325 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 TMEM42Q69YG0 159 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 ANKRD36A6QL64 1941 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 TRPM7Q96QT4 1865 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 FOXI3A8MTJ6 420 aaPredicted RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 ADMP35318 185 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 NANOS3P60323 173 aaKnown RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 SLAQ13239 276 aa6.08□□□□□ -1.44
COLCA1-205ENST00000620864 TRIP12Q14669 1992 aaPredicted RBP6.08□□□□□ -1.44
COLCA1-205ENST00000620864 SBF2Q86WG5 1849 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 TRAV12-3A0A0B4J271 114 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 HOXD3P31249 432 aaPredicted RBP6.07□□□□□ -1.44
COLCA1-205ENST00000620864 TSKUQ8WUA8 353 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 UNC13CQ8NB66 2214 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 DOCK9Q9BZ29 2069 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 MOSP00540 346 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 SCTP09683 121 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 HOXB3P14651 431 aaPredicted RBP6.07□□□□□ -1.44
COLCA1-205ENST00000620864 FAM90A1Q86YD7 464 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 COX14Q96I36 57 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 ATP6V0BQ99437 205 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 SSBP3Q9BWW4 388 aaPredicted RBP6.07□□□□□ -1.44
COLCA1-205ENST00000620864 SIPA1L1O43166 1804 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 TRAV1-1A0A0B4J248 108 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 F8VVB4 439 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 F8VWA3 439 aa6.07□□□□□ -1.44
COLCA1-205ENST00000620864 ZNHIT1O43257 154 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms