RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 DUSP13Q9UII6 198 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 MYOD1P15172 320 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 GGNQ86UU5 652 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 ZBTB34Q8NCN2 500 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 NABP2Q9BQ15 211 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 OBP2BQ9NPH6 170 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 ABCA1O95477 2261 aa12.01□□□□□ -0.49
SYNRG-225ENST00000619541 EP300Q09472 2414 aaPredicted RBP12.01□□□□□ -0.49
SYNRG-225ENST00000619541 REG1AP05451 166 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 ACP1P24666 158 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 TMEM167BQ9NRX6 74 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 MRPL27Q9P0M9 148 aaKnown RBP12□□□□□ -0.49
SYNRG-225ENST00000619541 LOXL2Q9Y4K0 774 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 TNCP24821 2201 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 FAM231BA6NCW3 169 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 H3BUT2 72 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 ISLRO14498 428 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 TBR1Q16650 682 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 NUP35Q8NFH5 326 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 OR1N2Q8NGR9 330 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 POM121L2Q96KW2 1035 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 POLDIP2Q9Y2S7 368 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 HIGD1CA8MV81 97 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 GGTLC3B5MD39 225 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 GDF5OSQ5U4N7 250 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 ST20Q9HBF5 79 aa12□□□□□ -0.49
SYNRG-225ENST00000619541 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 P0C879 139 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 FOLR3P41439 243 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 ALKBH6Q3KRA9 238 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 SYS1-DBNDD2H3BUS1 97 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 GPR183P32249 361 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 RPL39P5Q59GN2 51 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 HES4Q9HCC6 221 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 KMT2EQ8IZD2 1858 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 GFRA3O60609 400 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 HTR1DP28221 377 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 UBE2L3P68036 154 aaKnown RBP11.99□□□□□ -0.49
SYNRG-225ENST00000619541 FOXF2Q12947 444 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 TMEM249Q2WGJ8 235 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 BPIFA4PQ86YQ2 179 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
SYNRG-225ENST00000619541 MAP1BP46821 2468 aaKnown RBP11.98□□□□□ -0.49
SYNRG-225ENST00000619541 TRAV5A0A0B4J249 113 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 AREGP15514 252 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 Q0VFX4 171 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 SMIM21Q3B7S5 101 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 TMEM108Q6UXF1 575 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 LY96Q9Y6Y9 160 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 SMIM27A0A1W2PRY6 76 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 C3AR1Q16581 482 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 FAM71F2Q6NXP2 309 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 SNRNP40Q96DI7 357 aaKnown RBP11.98□□□□□ -0.49
SYNRG-225ENST00000619541 OR2V2Q96R30 315 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 A0A1W2PNU3 283 aaPredicted RBP11.98□□□□□ -0.49
SYNRG-225ENST00000619541 OOEPA6NGQ2 149 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 GTF2H5Q6ZYL4 71 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 PPP1R32Q7Z5V6 425 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 WDR86Q86TI4 376 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 OR13A1Q8NGR1 328 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 MBNL3Q9NUK0 354 aaKnown RBP11.98□□□□□ -0.49
SYNRG-225ENST00000619541 TMEM140Q9NV12 185 aa11.98□□□□□ -0.49
SYNRG-225ENST00000619541 CD5LO43866 347 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 OR1C1Q15619 314 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 LEAP2Q969E1 77 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 S1PR3Q99500 378 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 MAP1LC3CQ9BXW4 147 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 PKIBQ9C010 78 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 B3GALT5-AS1P59052 145 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 ARF6P62330 175 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 MLANAQ16655 118 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 CT55Q8WUE5 264 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 PLAUP00749 431 aa11.97□□□□□ -0.49
SYNRG-225ENST00000619541 ASPMQ8IZT6 3477 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 CDX4O14627 284 aaPredicted RBP11.96□□□□□ -0.49
SYNRG-225ENST00000619541 IGHV3-48P01763 117 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 PAX2Q02962 417 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 SPINT2O43291 252 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 CYC1P08574 325 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 CD59P13987 128 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 ARR3P36575 388 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 OR4S2Q8NH73 311 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 TMEM186Q96B77 213 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 PGLYRP4Q96LB8 373 aa11.96□□□□□ -0.49
SYNRG-225ENST00000619541 CHTOPQ9Y3Y2 248 aaKnown RBP11.96□□□□□ -0.49
SYNRG-225ENST00000619541 HCFC1P51610 2035 aa11.96□□□□□ -0.5
SYNRG-225ENST00000619541 A0A1W2PRE2 83 aa11.96□□□□□ -0.5
SYNRG-225ENST00000619541 TAS2R45P59539 299 aa11.96□□□□□ -0.5
SYNRG-225ENST00000619541 PLP1P60201 277 aa11.96□□□□□ -0.5
SYNRG-225ENST00000619541 MRPL49Q13405 166 aaKnown RBP11.96□□□□□ -0.5
SYNRG-225ENST00000619541 SAMD13Q5VXD3 122 aa11.96□□□□□ -0.5
SYNRG-225ENST00000619541 FAM214BQ7L5A3 538 aa11.96□□□□□ -0.5
SYNRG-225ENST00000619541 AMMECR1Q9Y4X0 333 aaPredicted RBP11.96□□□□□ -0.5
SYNRG-225ENST00000619541 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
SYNRG-225ENST00000619541 HIST1H1EP10412 219 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms