RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PLAURQ03405 335 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 KLHDC3Q9BQ90 382 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 EML5Q05BV3 1969 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 TIMP3P35625 211 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 PATE1Q8WXA2 126 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 C1QTNF4Q9BXJ3 329 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
COL5A1-208ENST00000618395 CACNA1EQ15878 2313 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 FAM219BQ5XKK7 198 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 CBLN3Q6UW01 205 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 ZNF818PQ6ZRF7 136 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 A0A1W2PPE3 182 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 MALP21145 153 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 SPEM2Q0P670 501 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 NTN1O95631 604 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 IL6RP08887 468 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-208ENST00000618395 DEFB103AP81534 67 aa12.79□□□□□ -0.36
COL5A1-208ENST00000618395 HELZP42694 1942 aaKnown RBP12.79□□□□□ -0.36
COL5A1-208ENST00000618395 MYF5P13349 255 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
COL5A1-208ENST00000618395 IGLV3-25P01717 112 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 RPL34P49207 117 aaKnown RBP12.78□□□□□ -0.36
COL5A1-208ENST00000618395 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-208ENST00000618395 UCP2P55851 309 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 SNRPD3P62318 126 aaKnown RBP12.78□□□□□ -0.36
COL5A1-208ENST00000618395 RFLNBQ8N5W9 214 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 LOC285556D6RIA3 1793 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 A0A1B0GW64 132 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 H3BTX0 84 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 WIPI1Q5MNZ9 446 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-208ENST00000618395 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 K7EP34 96 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 REG4Q9BYZ8 158 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
COL5A1-208ENST00000618395 TCF19Q9Y242 345 aa12.78□□□□□ -0.36
COL5A1-208ENST00000618395 IGKV3D-20A0A0C4DH25 116 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 CD33P20138 364 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 ABHD12Q8N2K0 398 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 SVIPQ8NHG7 77 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 ARPC1AQ92747 370 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 IGLV3-27P01718 113 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 TFF3Q07654 80 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 TMEM256Q8N2U0 113 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 DPH3Q96FX2 82 aa12.77□□□□□ -0.36
COL5A1-208ENST00000618395 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 RPRMLQ8N4K4 120 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 POLR3KQ9Y2Y1 108 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-208ENST00000618395 SBF2Q86WG5 1849 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 TRBV5-7A0A0A0MS05 114 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 CDK2AP2O75956 126 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 IGFBP2P18065 325 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 UNQ9370/PRO34162Q6UXP9 181 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 PLXND1Q9Y4D7 1925 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 AGRNO00468 2067 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 SP9P0CG40 484 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 SLC25A53Q5H9E4 307 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 NABP1Q96AH0 204 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 RNF7Q9UBF6 113 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 SF3B6Q9Y3B4 125 aaKnown RBP12.77□□□□□ -0.37
COL5A1-208ENST00000618395 ACACAQ13085 2346 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 HEXA-AS1Q9H8Q6 139 aa12.77□□□□□ -0.37
COL5A1-208ENST00000618395 ZIC3O60481 467 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 TDGF1P13385 188 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 C3orf79P0CE67 100 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 ZP4Q12836 540 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 IGLV3-16A0A075B6K0 115 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 H0Y8X5 98 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 NPC2P61916 151 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 ETDBQ3ZM63 59 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 GREM1O60565 184 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 GFRA3O60609 400 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
COL5A1-208ENST00000618395 C9JCJ5 164 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
COL5A1-208ENST00000618395 MPZP25189 248 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 APOBEC4Q8WW27 367 aaKnown RBP12.75□□□□□ -0.37
COL5A1-208ENST00000618395 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 OBSL1O75147 1896 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 TRPM7Q96QT4 1865 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 A0A1W2PQD3 144 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 Q9H3A6 140 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 ZNHIT1O43257 154 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 ELSPBP1Q96BH3 223 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 IGHV3OR15-7A0A075B7D8 119 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 NPIPB11E5RHQ5 1161 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 SUMO4Q6EEV6 95 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 CD160O95971 181 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 THY1P04216 161 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 DUTP33316 252 aaKnown RBP12.75□□□□□ -0.37
COL5A1-208ENST00000618395 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
COL5A1-208ENST00000618395 GCSAMQ8N6F7 178 aa12.75□□□□□ -0.37
COL5A1-208ENST00000618395 NRXN3Q9Y4C0 1643 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms