RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ENSAO43768 121 aaKnown RBP11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 SLC25A17O43808 307 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 PDE6DO43924 150 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 IL3RAP26951 378 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 WT1-ASQ06250 92 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR2T10Q8NGZ9 312 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 SLC45A2Q9UMX9 530 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 COMMD5Q9GZQ3 224 aa11.4□□□□□ -0.58
PCDHGA3-202ENST00000612467 APOA2P02652 100 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 RPL29P47914 159 aaKnown RBP11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 RHOBP62745 196 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 RPL8P62917 257 aaKnown RBP11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 LRRC10Q5BKY1 277 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 UHRF2Q96PU4 802 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 HIST1H2BLQ99880 126 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 ZNF430Q9H8G1 570 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 ZFHX3Q15911 3703 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 ZNF320A2RRD8 509 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 F6UZH7 168 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 SIAH2O43255 324 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR7C2O60412 319 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 ZNF124Q15973 351 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 C11orf42Q8N5U0 333 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR5AN1Q8NGI8 311 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 SGMS2Q8NHU3 365 aa11.39□□□□□ -0.59
PCDHGA3-202ENST00000612467 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 K7ENP7 123 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 CRYBB3P26998 211 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 ZNF90Q03938 601 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 SFRP2Q96HF1 295 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 C14orf144Q96I85 54 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 DMRT1Q9Y5R6 373 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 DEFA6Q01524 100 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 MEF2CQ06413 473 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 HCP5Q6MZN7 132 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 ANAPC16Q96DE5 110 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 ZNF257Q9Y2Q1 563 aa11.38□□□□□ -0.59
PCDHGA3-202ENST00000612467 IGHV1-69-2A0A0G2JMI3 117 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 VENTXO95231 258 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 IGLV2-23P01705 113 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 DLX6P56179 175 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 RAB31Q13636 194 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 PACRGQ96M98 296 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 WNK2Q9Y3S1 2297 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 SPINK4O60575 86 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 GGCTO75223 188 aaKnown RBP11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 BTF3P20290 206 aaKnown RBP11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 IMMP2LQ96T52 175 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 PRB4P10163 310 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 COX7A1P24310 79 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 CD69Q07108 199 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 OSR1Q8TAX0 266 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 ST6GALNAC6Q969X2 333 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
PCDHGA3-202ENST00000612467 MDFIC2A0A1B0GVS7 189 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 IGHV1-8P0DP01 117 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 PYYP10082 97 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 C2orf83Q53S99 150 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 NPIPB3Q92617 1050 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 GGTLC3B5MD39 225 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 AMBPP02760 352 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 SSTP61278 116 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 MRGPRG-AS1Q2M3A8 158 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 TMEM249Q2WGJ8 235 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 TMEM155Q4W5P6 130 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 TMEM177Q53S58 311 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 ACTL10Q5JWF8 245 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 TEX38Q6PEX7 206 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR1P1Q8NH06 330 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 PRO1933Q9H354 126 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 GSX1Q9H4S2 264 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
PCDHGA3-202ENST00000612467 A0A1W2PPI3 338 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 MOSP00540 346 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 SLC35B1P78383 322 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR4C13Q8NGP0 309 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 OR1L8Q8NGR8 309 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 VPS13CQ709C8 3753 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 NUPR1O60356 82 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 AREGP15514 252 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 FXYD3Q14802 87 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 SPTAN1Q13813 2472 aaKnown RBP11.35□□□□□ -0.59
PCDHGA3-202ENST00000612467 ELOA3CA0A087WX78 387 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 CD3EP07766 207 aa11.34□□□□□ -0.59
PCDHGA3-202ENST00000612467 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms